Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4361 |
Symbol | tatD |
ID | 5587005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4349128 |
End bp | 4349910 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640927976 |
Product | DNase TatD |
Protein accession | YP_001465325 |
Protein GI | 157158037 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA TCGGCGTTAA TTTGACCAGT TCGCAATTTG CGAAAGACCG TGATGATGTT GTAGCGCGCG CTTTTGACGC GGGAGTTAAT GGGCTACTCA TCACCGGCAC TAACCTGCGT GAAAGCCAGC AGGCGCAAAA GCTGGCGCGT CAGTATTCGT CCTGTTGGTC AACGGCGGGC GTACATCCTC ACGACAGCAG CCAGTGGCAA GCTGCGACTG AAGAAGCGAT TATTGAGCTG GCCGCGCAGC CAGAAGTGGT GGCGATTGGT GAATGTGGTC TCGACTTTAA CCGCAACTTT TCGACGCCGG AAGAGCAGGA ACGCGCTTTT GTTGCTCAGC TACGCATTGC CGCAGAATTA AACATGCCGG TATTTATGCA CTGTCGCGAT GCCCACGAGC GGTTTATGAC ATTGCTGGAG CCGTGGCTGG ATAAACTACC TGGTGCGGTT CTTCATTGCT TTACCGGCAC ACGCGAAGAG ATGCAGGCGT GCGTGGCGCG TGGAATTTAT ATCGGCATTA CCGGTTGGGT TTGCGATGAA CGACGCGGGC TGGAGCTGCG GGAATTGTTG CCGTTGATTC CGGCGGAGAA ATTGCTGATC GAAACTGATG CGCCGTATCT GCTCCCGCGC GATCTCACGC CAAAGCCATC ATCCCGGCGC AACGAGCCAG CCCATCTGCC CCATATTTTG CAACGTATTG CGCACTGGCG TGGAGAAGAT GCCGCATGGC TGGCTGCCAC CACGGATGCC AATGTCAAAA CACTGTTTGG GATTGCGTTT TAG
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Protein sequence | MFDIGVNLTS SQFAKDRDDV VARAFDAGVN GLLITGTNLR ESQQAQKLAR QYSSCWSTAG VHPHDSSQWQ AATEEAIIEL AAQPEVVAIG ECGLDFNRNF STPEEQERAF VAQLRIAAEL NMPVFMHCRD AHERFMTLLE PWLDKLPGAV LHCFTGTREE MQACVARGIY IGITGWVCDE RRGLELRELL PLIPAEKLLI ETDAPYLLPR DLTPKPSSRR NEPAHLPHIL QRIAHWRGED AAWLAATTDA NVKTLFGIAF
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