Gene EcE24377A_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4302 
SymbolwecE 
ID5589928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4296987 
End bp4298117 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content54% 
IMG OID640927919 
ProductTDP-4-oxo-6-deoxy-D-glucose transaminase 
Protein accessionYP_001465272 
Protein GI157158755 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID[TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.684213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAT TTAACGCACC GCCGGTGGTG GGAACCGAAC TCGACTATAT GCAGTCGGCA 
ATGGGTAGCG GCAAACTGTG TGGCGATGGC GGTTTTACCC GTCGCTGCCA GCAGTGGCTG
GAGCAACGTT TTGGCAGCGC CAAAGTGTTA CTGACGCCGT CCTGCACCGC TTCGCTGGAG
ATGGCGGCGC TGCTGCTCGA TATCCAGCCT GGCGATGAAG TGATCATACC GAGCTACACC
TTTGTCTCCA CCGCCAATGC CTTTGTGCTG CGTGGCGCAA AAATCGTTTT TGTGGATGTT
CGCCCGGACA CCATGAACAT CGACGAAACG CTGATTGAAG CGGCGATCAC CGACAAAACG
CGCGTTATCG TGCCGGTCCA TTACGCGGGT GTGGCCTGCG AAATGGACAC CATTATAGCG
TTGGCGAAAA AGCATAATTT GTTTGTGGTA GAAGATGCCG CTCAGGGCGT GATGTCCACT
TACAAAGGGC GTGCACTGGG AACCATTGGT CATATTGGCT GCTTTAGCTT CCATGAAACC
AAAAACTACA CGGCGGGCGG TGAAGGCGGC GCGACGCTGA TTAACGATAA AGCGTTAATC
GAACGAGCCG AGATCATCCG TGAAAAGGGC ACTAACCGCA GCCAGTTCTT CCGTGGTCAG
GTCGATAAAT ATACCTGGCG CGATATTGGC TCCAGCTATT TGATGTCCGA TCTGCAAGCT
GCATACCTGT GGGCGCAACT GGAAGCAGCG GATCGTATCA ACCAGCAACG TCTGGCGCTG
TGGCAAAACT ACTACGATGC GTTAGCGCCT CTGGCGAAAG CCGGGCGTAT CGAGCTGCCG
TCGATTCCCG ATGGCTGCGT GCAGAACGCG CATATGTTCT ACATTAAACT GCGGGATATT
GATGACCGGA GCGCGTTGAT TAACTTTCTG AAAGAAGCGG AAATCATGGC GGTGTTTCAT
TACATTCCGC TGCACGGTTG CCCTGCGGGG GAACACTTTG GTGAGTTCCA CGGTGAAGAT
CGCTACACCA CCAAAGAGAG CGAGCGCCTG CTGCGCCTGC CGCTGTTCTA CAACCTGTCG
CCCGTCAATC AGCGTACGGT AATTGCGACT TTGTTGAACT ACTTTTCCTG A
 
Protein sequence
MIPFNAPPVV GTELDYMQSA MGSGKLCGDG GFTRRCQQWL EQRFGSAKVL LTPSCTASLE 
MAALLLDIQP GDEVIIPSYT FVSTANAFVL RGAKIVFVDV RPDTMNIDET LIEAAITDKT
RVIVPVHYAG VACEMDTIIA LAKKHNLFVV EDAAQGVMST YKGRALGTIG HIGCFSFHET
KNYTAGGEGG ATLINDKALI ERAEIIREKG TNRSQFFRGQ VDKYTWRDIG SSYLMSDLQA
AYLWAQLEAA DRINQQRLAL WQNYYDALAP LAKAGRIELP SIPDGCVQNA HMFYIKLRDI
DDRSALINFL KEAEIMAVFH YIPLHGCPAG EHFGEFHGED RYTTKESERL LRLPLFYNLS
PVNQRTVIAT LLNYFS