Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4265 |
Symbol | rbsA |
ID | 5587294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4255675 |
End bp | 4257180 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640927880 |
Product | D-ribose transporter ATP binding protein |
Protein accession | YP_001465239 |
Protein GI | 157158385 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0146477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCAT TACTTCAGCT TAAAGGCATC GATAAAGCCT TCCCGGGCGT AAAAGCCCTC TCGGGCGCAG CGTTAAATGT CTATCCTGGC CGCGTGATGG CGCTGGTGGG CGAAAACGGC GCGGGTAAAT CCACCATGAT GAAAGTGCTT ACTGGTATCT ATGCTCGCGA TGCCGGCACG CTTTTATGGC TGGGGAAAGA AACGACATTT ACCGGGCCGA AATCTTCCCA GGAAGCCGGG ATTGGGATTA TCCATCAGGA ACTGAACCTG ATCCCGCAGT TGACCATTGC CGAAAACATT TTCCTCGGTC GTGAGTTTGT TAATCGCTTT GGCAAAATTG ACTGGAAAAC CATGTATGCC GAAGCGGATA AATTGCTGGC TAAACTTAAC CTGCGCTTTA AAAGCGACAA GCTGGTGGGC GATCTTTCCA TCGGTGACCA GCAAATGGTT GAAATCGCCA AAGTGCTGAG CTTTGAGTCG AAAGTCATCA TTATGGATGA ACCGACCGAT GCGCTGACCG ATACCGAAAC CGAATCCCTG TTCCGCGTCA TACGCGAGCT GAAATCGCAA GGCCGCGGTA TTGTCTATAT CTCCCACCGC ATGAAAGAAA TCTTCGAGAT TTGCGATGAC GTTACCGTTT TTCGTGACGG GCAATTTATT GCTGAGCGCG AAGTGGCATC ACTGACCGAA GATTCGCTGA TTGAGATGAT GGTGGGCCGC AAGCTAGAAG ATCAATATCC ACACCTGGAC AAAGCGCCGG GAGATATCCG CCTGAAAGTC GATAATCTCT GCGGACCTGG CGTTAACGAT GTCTCTTTTA CTTTACGCAA AGGCGAAATT CTTGGCGTCT CTGGTTTGAT GGGCGCAGGT CGTACCGAAC TGATGAAAGT GCTCTACGGC GCACTACCGC GCACCAGCGG TTACGTCACC CTGGATGGGC ATGAAGTCGT TACCCGTTCA CCGCAGGATG GCCTGGCAAG CGGCATTGTG TATATCTCCG AAGACCGTAA ACGTGACGGT TTAGTGTTGG GCATGTCAGT AAAAGAGAAC ATGTCGCTGA CAGCGCTGCG CTACTTCAGC CGCGCTGGCG GCAGTTTGAA GCATGCCGAT GAACAGCAGG CTGTGAGTGA TTTCATTCGT CTGTTTAATG TGAAAACACC GTCGATGGAA CAGGCAATTG GTCTGCTTTC CGGTGGCAAT CAGCAAAAAG TGGCGATTGC CCGCGGTCTG ATGACACGCC CCAAAGTGTT GATCCTTGAT GAACCTACCC GTGGCGTAGA TGTCGGCGCG AAAAAAGAGA TCTATCAACT GATTAACCAG TTCAAAGCCG ATGGCTTGAG CATCATTCTG GTGTCATCGG AGATGCCAGA AGTATTAGGC ATGAGCGATC GCATCATCGT CATGCATGAA GGGCATCTCA GCGGGGAATT TACTCGTGAG CAGGCCACCC AGGAAGTGTT AATGGCTGCC GCTGTGGGCA AGCTTAATCG CGTGAATCAG GAGTAA
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Protein sequence | MEALLQLKGI DKAFPGVKAL SGAALNVYPG RVMALVGENG AGKSTMMKVL TGIYARDAGT LLWLGKETTF TGPKSSQEAG IGIIHQELNL IPQLTIAENI FLGREFVNRF GKIDWKTMYA EADKLLAKLN LRFKSDKLVG DLSIGDQQMV EIAKVLSFES KVIIMDEPTD ALTDTETESL FRVIRELKSQ GRGIVYISHR MKEIFEICDD VTVFRDGQFI AEREVASLTE DSLIEMMVGR KLEDQYPHLD KAPGDIRLKV DNLCGPGVND VSFTLRKGEI LGVSGLMGAG RTELMKVLYG ALPRTSGYVT LDGHEVVTRS PQDGLASGIV YISEDRKRDG LVLGMSVKEN MSLTALRYFS RAGGSLKHAD EQQAVSDFIR LFNVKTPSME QAIGLLSGGN QQKVAIARGL MTRPKVLILD EPTRGVDVGA KKEIYQLINQ FKADGLSIIL VSSEMPEVLG MSDRIIVMHE GHLSGEFTRE QATQEVLMAA AVGKLNRVNQ E
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