Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4219 |
Symbol | mdtL |
ID | 5587247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4208377 |
End bp | 4209552 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640927835 |
Product | multidrug efflux system protein MdtL |
Protein accession | YP_001465194 |
Protein GI | 157159363 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGCT TTTTAATTTG TAGTTTTGCC CTGGTTTTAC TTTATCCCGC CGGGATTGAT ATGTACCTCG TTGGTTTACC GCGCATCGCC GCCGATCTCA ATGCCAGCGA AGCGCAGTTG CATATTGCGT TCTCCGTTTA TCTGGCGGGC ATGGCAGCTG CGATGTTATT TGCCGGTAAA GTGGCCGATC GTTCAGGGAG AAAGCCTGTC GCCATCCCCG GCGCGGCGCT ATTTATTATC GCTTCGGTGT TCTGTTCACT GGCTGAAACC AGCACGTTAT TTCTTGCAGG GCGCTTTCTA CAGGGGTTGG GCGCAGGCTG TTGTTACGTG GTGGCGTTCG CCATTTTGCG CGACACGCTG GATGATCGAC GTCGGGCTAA AGTGCTGTCG TTACTCAACG GTATTACCTG CATCATTCCG GTGTTAGCGC CGGTGCTCGG ACACCTGATT ATGCTTAAAT TCCCTTGGCA GAGTCTGTTC TGGACGATGG CAATGATGGG CATCGCGGTA CTGATGTTAT CTTTGTTTAT TTTAAAAGAA ACGCGCCCAG CGTCCCCCGC TGCTTCGGAC AAACCACGAG AAAATAGCGA GTCGCTGCTT AATCGGTTTT TCCTCAGCCG TGTTGTTATC ACCACCCTCA GCGTTTCGGT GATCCTCACT TTCGTCAATA CATCGCCGGT ATTGCTGATG GAAATCATGG GTTTTGAGCG CGGAGAATAC GCCACCATTA TGGCGTTGAC CGCTGGCGTC AGCATGACCG TTTCATTCTC CACGCCATTT GCGCTGGGAA TTTTTAAGCC ACGTACGTTG ATGATCACCT CGCAGGTGTT ATTCCTTGCG GCGGGGATCA CCCTTGCCGT TTCACCTTCC CATGCGGTTT CTCTGTTTGG TATCACGCTG ATTTGCGCCG GTTTCTCGGT AGGTTTTGGC GTAGCGATGA GTCAGGCGTT AGGACCATTT TCATTACGCG CGGGCGTAGC CAGCTCGACC TTAGGTATTG CGCAGGTTTG CGGTTCGTCA CTGTGGATTT GGCTGGCAGC GGTGGTTGGT ATCGGCGCAT GGAATATGCT GATCGGGATT CTGATTGCCT GTAGCATAGT GAGCCTGTTG CTGATTATGT TCGTCGCGCC TGGACGCCCC GTTGCCGCTC ATGAAGAAAT CCATCACCAC GCTTGA
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Protein sequence | MSRFLICSFA LVLLYPAGID MYLVGLPRIA ADLNASEAQL HIAFSVYLAG MAAAMLFAGK VADRSGRKPV AIPGAALFII ASVFCSLAET STLFLAGRFL QGLGAGCCYV VAFAILRDTL DDRRRAKVLS LLNGITCIIP VLAPVLGHLI MLKFPWQSLF WTMAMMGIAV LMLSLFILKE TRPASPAASD KPRENSESLL NRFFLSRVVI TTLSVSVILT FVNTSPVLLM EIMGFERGEY ATIMALTAGV SMTVSFSTPF ALGIFKPRTL MITSQVLFLA AGITLAVSPS HAVSLFGITL ICAGFSVGFG VAMSQALGPF SLRAGVASST LGIAQVCGSS LWIWLAAVVG IGAWNMLIGI LIACSIVSLL LIMFVAPGRP VAAHEEIHHH A
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