| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4218 |
|---|
| Symbol | tnaB |
|---|
| ID | 5586347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4206998 |
|---|
| End bp | 4208245 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640927834 |
|---|
| Product | tryptophan permease TnaB |
|---|
| Protein accession | YP_001465193 |
|---|
| Protein GI | 157158998 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATC AAGCTGAAAA AAAGCACTCT GCATTTTGGG GTGTTATGGT TATAGCAGGT
ACAGTAATTG GTGGAGGTAT GTTTGCTTTA CCTGTTGATC TTGCCGGTGC CTGGTTTTTC
TGGGGTGCCT TTATCCTTAT CATTGCCTGG TTTTCAATGC TTCATTCCGG GTTATTGTTA
TTAGAAGCAA ATTTAAATTA TCCTGTCGGC TCCAGTTTTA ACACCATCAC CAAAGATTTA
ATCGGTAACA CCTGGAACAT TATCAGCGGT ATTACCGTTG CCTTCGTTCT CTATATCCTC
ACTTATGCCT ATATCTCTGC TAATGGTGCG ATCATTAGTG AAACGATATC AATGAATTTG
GGCTATCACG CTAATCCACG TATTGTCGGG ATCTGCACAG CCATTTTCGT TGCCAGCGTA
TTGTGGATAA GTTCGTTAGC CGCCAGTCGC ATTACCTCAT TGTTCCTCGG GCTGAAGATT
ATCTCCTTTG TGATCGTGTT TGGTTCTTTC TTCTTCCAGG TCGATTACTC CATCCTGCGC
GATGCCACCA GCACCACTGC GGGAACGTCT TACTTCCCGT ATATCTTTAT GGCTTTGCCG
GTGTGTCTGG CGTCATTTGG TTTCCACGGC AATATTCCCA GCCTGATTAT TTGCTATGGA
AAACGCAAAG ATAAGTTAAT CAAAAGCGTG GTATTTGGTT CGCTGCTGGC GCTGGTGATT
TATCTCTTCT GGCTCTATTG CACGATGGGG AATATTCCGC GCGAAAGCTT TAAGGCGATA
ATCTCCTCAG GCGGCAACGT TGATTCGCTG GTGAAATCGT TCCTCGGCAC CAAACAGCAC
GGCATTATCG AGTTTTGCCT GCTGGTGTTC TCTAACTTAG CTGTTGCCAG TTCGTTCTTT
GGTGTCACGC TGGGGTTGTT CGATTATCTG GCGGACCTGT TTAAGATTGA TAACTCCCAC
GGCGGGCGTT TCAAAACCGT GCTGTTAACC TTCCTGCCAC CTGCGTTGTT GTATCTGATC
TTCCCGAACG GCTTTATTTA CGGGATCGGC GGTGCCGGGC TGTGCGCCAC CATCTGGGCG
GTCATTATTC CCGCAGTGCT TGCAATCAAA GCTCGCAAGA AGTTTCCCAA TCAGATGTTC
ACGGTCTGGG GCGGCAATCT TATTCCGGCG ATTGTCATTC TCTTTGGTAT AACCGTGATT
TTGTGCTGGT TCGGCAACGT CTTTAACGTG TTACCTAAAT TTGGCTAA
|
|---|
| Protein sequence | MTDQAEKKHS AFWGVMVIAG TVIGGGMFAL PVDLAGAWFF WGAFILIIAW FSMLHSGLLL
LEANLNYPVG SSFNTITKDL IGNTWNIISG ITVAFVLYIL TYAYISANGA IISETISMNL
GYHANPRIVG ICTAIFVASV LWISSLAASR ITSLFLGLKI ISFVIVFGSF FFQVDYSILR
DATSTTAGTS YFPYIFMALP VCLASFGFHG NIPSLIICYG KRKDKLIKSV VFGSLLALVI
YLFWLYCTMG NIPRESFKAI ISSGGNVDSL VKSFLGTKQH GIIEFCLLVF SNLAVASSFF
GVTLGLFDYL ADLFKIDNSH GGRFKTVLLT FLPPALLYLI FPNGFIYGIG GAGLCATIWA
VIIPAVLAIK ARKKFPNQMF TVWGGNLIPA IVILFGITVI LCWFGNVFNV LPKFG
|
|---|
| |