| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4217 |
|---|
| Symbol | tnaA |
|---|
| ID | 5587073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4205492 |
|---|
| End bp | 4206907 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640927833 |
|---|
| Product | tryptophanase |
|---|
| Protein accession | YP_001465192 |
|---|
| Protein GI | 157155675 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3033] Tryptophanase |
|---|
| TIGRFAM ID | [TIGR02617] tryptophanase, leader peptide-associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.770521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACT TTAAACATCT CCCTGAACCG TTCCGCATTC GTGTTATTGA GCCAGTAAAA
CGTACTACTC GCGCTTATCG TGAAGAAGCA ATTATTAAAT CCGGTATGAA CCCGTTCCTG
CTGGATAGCG AAGATGTGTT TATCGATTTA CTGACCGACA GCGGCACCGG GGCAGTAACC
CAAAGTATGC AGGCAGCGAT GATGCGCGGC GACGAAGCCT ACAGCGGCAG CCGCAGCTAC
TATGCGTTAG CCGAGTCAGT GAAAAATATC TTTGGTTATC AATATACTAT TCCGACTCAC
CAGGGCCGTG GCGCAGAGCA AATCTATATT CCGGTACTGA TTAAAAAACG CGAGCAGGAA
AAAGGCCTGG ATCGCAGCAA AATGGTGGCA TTCTCTAACT ATTTCTTTGA TACCACGCAG
GGCCATAGCC AGATTAACGG CTGTACCGTG CGTAACGTCT ATATCAAAGA AGCCTTCGAT
ACGGGCGTGC GTTACGACTT TAAAGGCAAC TTTGACCTCG AAGGATTAGA ACGCGGTATT
GAAGAAGTTG GCCCGAATAA CGTGCCGTAT ATCGTTGCAA CCATCACCAG TAACTCTGCA
GGTGGTCAGC CGGTTTCACT GGCAAACTTA AAAGCGATGT ACAGCATCGC GAAGAAATAC
GATATTCCGG TGGTAATGGA CTCCGCACGC TTTGCTGAAA ACGCCTATTT CATCAAGCAG
CGTGAAGCAG AATACAAAGA CTGGACCATC GAGCAGATCA CCCGCGAAAC CTACAAATAT
GCCGATATGC TGGCGATGTC CGCCAAGAAA GATGCGATGG TGCCGATGGG CGGCTTGCTG
TGCATGAAAG ACGACAGCTT CTTTGATGTG TACACCGAGT GCAGAACCCT TTGCGTGGTG
CAGGAAGGCT TCCCGACATA TGGCGGCCTG GAAGGCGGCG CGATGGAGCG TCTGGCGGTA
GGTCTGTATG ACGGCATGAA TCTCGACTGG CTGGCTTATC GTATCGCGCA GGTACAGTAT
CTGGTCGATG GTCTGGAAGA GATTGGCGTT GTCTGCCAGC AGGCGGGCGG TCACGCGGCA
TTCGTTGATG CCGGTAAACT GCTGCCGCAT ATCCCGGCAG ACCAGTTCCC GGCACAGGCG
CTGGCGTGCG AGCTGTATAA AGTCGCCGGT ATCCGTGCGG TAGAAATTGG CTCTTTCCTG
TTAGGCCGCG ATCCGAAAAC CGGTAAACAA CTGCCATGCC CGGCTGAACT GCTGCGTTTA
ACCATTCCGC GCGCAACATA TACTCAAACA CATATGGACT TCATTATTGA AGCCTTTAAA
CATGTGAAAG AGAACGCGGC GAATATTAAA GGATTAACCT TTACCTACGA ACCAAAAGTA
TTGCGTCACT TCACCGCAAA ACTGAAAGAA GTTTAA
|
|---|
| Protein sequence | MENFKHLPEP FRIRVIEPVK RTTRAYREEA IIKSGMNPFL LDSEDVFIDL LTDSGTGAVT
QSMQAAMMRG DEAYSGSRSY YALAESVKNI FGYQYTIPTH QGRGAEQIYI PVLIKKREQE
KGLDRSKMVA FSNYFFDTTQ GHSQINGCTV RNVYIKEAFD TGVRYDFKGN FDLEGLERGI
EEVGPNNVPY IVATITSNSA GGQPVSLANL KAMYSIAKKY DIPVVMDSAR FAENAYFIKQ
REAEYKDWTI EQITRETYKY ADMLAMSAKK DAMVPMGGLL CMKDDSFFDV YTECRTLCVV
QEGFPTYGGL EGGAMERLAV GLYDGMNLDW LAYRIAQVQY LVDGLEEIGV VCQQAGGHAA
FVDAGKLLPH IPADQFPAQA LACELYKVAG IRAVEIGSFL LGRDPKTGKQ LPCPAELLRL
TIPRATYTQT HMDFIIEAFK HVKENAANIK GLTFTYEPKV LRHFTAKLKE V
|
|---|
| |