| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4148 |
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| Symbol | ligB |
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| ID | 5589251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 4135427 |
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| End bp | 4137115 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640927768 |
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| Product | NAD-dependent DNA ligase LigB |
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| Protein accession | YP_001465128 |
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| Protein GI | 157158891 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.969555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGATGA AAGTATGGAT GGCGATATTA ATAAGTATCT TGTGCTGGCA ATCATCTGTG
TGGGCGGTCT GTCCGGCCTG GTCGCCAGCC AGAGCACAGG AAGAAATTTC CCGCCTGCAA
CAGCAAATAA AACAGTGGGA CGATGACTAC TGGAAGGAAG GAAAAAGTGA GGTGGAAGAC
GGTGTTTACG ATCAGTTAAG CGCCCGTCTT ACGCAGTGGC AACGCTGCTT TGGGAGCGAG
CCCCGCGACG TGATGATGCC GCCTTTAAAT GGTGCGGTTA TGCATCCGGT TGCCCATACG
GGTGTACGCA AAATGGTGGA TAAAAACGCA TTAAGTCTGT GGATGCGAGA ACGTAGCGAT
CTTTGGGTGC AGCCAAAAGT TGATGGCGTT GCGGTAACCC TGGTTTATCG GGACGGGAAA
CTGAACAAAG CAATCAGTCG CGGTAATGGC CTGAAAGGCG AGGACTGGAC GCAGAAAGTT
AGCTTAATTT CCGCTGTGCC GCAAACCGTT AGCGGGCCTT TAGCCAACAG TACGCTTCAG
GGGGAAATAT TTCTCCAGCG CGAGGGGCAT ATCCAACAAC AAATGGGGGG AATAAATGCC
CGCGCAAAAG TTGCTGGCCT GATGATGCGC CAGGACGATA GCGACACGCT GAATTCTCTG
GGCGTTTTTG TCTGGGCATG GCCGGATGGA CCGCAGTTAA TGACCGATCG TTTAAAGGAG
CTGGCTACCG CAGGTTTTAC TCTAACGCAG AGGTATACCC GTGCGGTTAA AAATGCTGAT
GAGGTTGCGC GCGTACGCAA TGAGTGGTGG AAAGCGAAAT TACCCTTCGT CACCGATGGC
GTGGTTGTGC GAGGGGCGAA AGAACCCGAA TCCCGCCATT GGCTACCAGG CCAGGCAGAA
TGGCTGGTGG CCTGGAAATA TCAACCTGTA GCTCAGGTTG CCGAAGTGAA GGCGATTCAG
TTTGCGGTGG GTAAGAGCGG TAAAATATCG GTGGTTGCGT CACTCGCACC TGTCATGCTG
GATGATAAAA AAGTCCAGCG GGTGAATATT GGTTCCGTCA GGCGCTGGCA GGAGTGGGAT
ATTGCGCCTG GTGATCAGAT CCTCGTCAGC CTTGCCGGTC AGGGTATTCC TCGCATTGAT
GATGTGGTCT GGCGCGGTGC AGAACGTACA AAACCGACAC CACCAGAAAA CCGCTTTAAC
TCATTGACCT GCTACTTTGC TTCTGATGTT TGTCAGGAAC AGTTCATTTC ACGCTTAGTC
TGGCTGGGGT CAAAACAGGT TCTGGGGCTG GATGGTATTG GTGAGGCCGG CTGGCGCGCG
CTGCATCAGA CTCATCGCTT TGAGCATATC TTTTCCTGGC TTTTATTAAC GCCAGAGCAA
TTACAGAACA CGCCGGGGAT CGCGAAAAGT AAAAGTGCGC AGCTATGGCA TCGGTTTAAT
CTGGCTCGTA AGCAGCCTTT TACTCGCTGG GTGATGGCAA TGGGAATACC GCTAACCCGG
GCGGCGCTTA ATGCCAGTGA TGAACGGTCC TGGTCGCAAC TTTTATTTAG CACGGAGCAG
TTCTGGCAGC AGCTGCCGGG GACTGGATCG GGGCGCGCCA GACAGGTTAT TGAATGGAAG
GAAAATGCGC AAATCAAGAA GCTGGGCAGT TGGCTGGCTG CCCAGCAGAT CACAGGTTTT
GAACCTTAG
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| Protein sequence | MMMKVWMAIL ISILCWQSSV WAVCPAWSPA RAQEEISRLQ QQIKQWDDDY WKEGKSEVED
GVYDQLSARL TQWQRCFGSE PRDVMMPPLN GAVMHPVAHT GVRKMVDKNA LSLWMRERSD
LWVQPKVDGV AVTLVYRDGK LNKAISRGNG LKGEDWTQKV SLISAVPQTV SGPLANSTLQ
GEIFLQREGH IQQQMGGINA RAKVAGLMMR QDDSDTLNSL GVFVWAWPDG PQLMTDRLKE
LATAGFTLTQ RYTRAVKNAD EVARVRNEWW KAKLPFVTDG VVVRGAKEPE SRHWLPGQAE
WLVAWKYQPV AQVAEVKAIQ FAVGKSGKIS VVASLAPVML DDKKVQRVNI GSVRRWQEWD
IAPGDQILVS LAGQGIPRID DVVWRGAERT KPTPPENRFN SLTCYFASDV CQEQFISRLV
WLGSKQVLGL DGIGEAGWRA LHQTHRFEHI FSWLLLTPEQ LQNTPGIAKS KSAQLWHRFN
LARKQPFTRW VMAMGIPLTR AALNASDERS WSQLLFSTEQ FWQQLPGTGS GRARQVIEWK
ENAQIKKLGS WLAAQQITGF EP
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