Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4132 |
Symbol | rfaG |
ID | 5586225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4121884 |
End bp | 4123008 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640927751 |
Product | lipopolysaccharide core biosynthesis protein RfaG |
Protein accession | YP_001465111 |
Protein GI | 157157470 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000485252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGTTG CTTTTTGTTT ATATAAATAT TTTCCCTTTG GCGGTTTGCA GCGCGATTTT ATGCGTATTG CTCAGACAGT CGCCGCCCGA GGTCATCATG TTCGGGTTTA TACCCAGTCG TGGGAAGGCG AATGCCCTGA TGTATTTGAA CTGATCAAAG TGCCGGTTAA ATCGCGTACC AATCACGGGC GCAATGCGGA GTATTTTACC TGGGTGCAAA AACATTTACG CGAACATCCC GTCGATAAAG TCGTTGGATT CAACAAAATG CCGGGGCTGG ACGTTTATTA TGCCGCTGAT GTTTGTTATG CCGAGAAAGT AGCGCAGGAG AAAGGCTTTT TCTATCGCCT GACGTCACGT TATCGCCATT ATGCCGCCTT TGAGCGGGCA ACCTTCGAAC AGGGCAAGCC GACACAGCTG CTGATGCTGA CAGATAAGCA AATCGCCGAT TTCCAGAAAC ATTATCAGAC TGAAGCGGAG CGTTTTCATA TTCTGCCACC GGGGATTTAT CCTGATCGTA AATATAGCCA GCAGCCAGCC AATAGCCGTG AAATATTCCG TAAGAAGAAT GGAATAACCG AACAACAATA TTTATTGTTG CAGGTCGGTT CAGACTTCAC GCGTAAAGGT GTCGATCGTT CCATTGAAGC ACTTGCTTCG TTACCGGATT CGCTGCGCCA CAACACATTG CTATATGTTG TTGGGCAGGA TAAACCGCGA AAATTTGAGG CGCTGGCAGA AAAACGCGGC GTGCGCAGTA ATGTTCACTT TTTCTCGGGG CGCAATGATG TCTCGGAATT AATGGCGGCG GCGGATTTAT TACTGCATCC TGCCTACCAG GAAGCGGCGG GAATTGTGCT GCTGGAAGCG ATTACTGCAG GATTACCGGT ACTAACAACA GCCGTTTGTG GCTATGCGCA TTATATTGTC GACGCCAATT GCGGCGAGGC TATTGCTGAG CCATTCCGCC AGGAAACATT GAATGAGATT TTACGCAAAG CGTTAACGCA ATCTTCATTG CGCCAGGCCT GGGCGGAAAA TGCGCGACAT TATGCTGATA CACAAGATTT ATACAGTCTG CCAGAGAAAG CGGCGGATAT CATAACGGGT GGTCTGGATG GTTGA
|
Protein sequence | MIVAFCLYKY FPFGGLQRDF MRIAQTVAAR GHHVRVYTQS WEGECPDVFE LIKVPVKSRT NHGRNAEYFT WVQKHLREHP VDKVVGFNKM PGLDVYYAAD VCYAEKVAQE KGFFYRLTSR YRHYAAFERA TFEQGKPTQL LMLTDKQIAD FQKHYQTEAE RFHILPPGIY PDRKYSQQPA NSREIFRKKN GITEQQYLLL QVGSDFTRKG VDRSIEALAS LPDSLRHNTL LYVVGQDKPR KFEALAEKRG VRSNVHFFSG RNDVSELMAA ADLLLHPAYQ EAAGIVLLEA ITAGLPVLTT AVCGYAHYIV DANCGEAIAE PFRQETLNEI LRKALTQSSL RQAWAENARH YADTQDLYSL PEKAADIITG GLDG
|
| |