Gene EcE24377A_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4131 
SymbolrfaP 
ID5588171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4121094 
End bp4121891 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content47% 
IMG OID640927750 
Productlipopolysaccharide core biosynthesis protein RfaP 
Protein accessionYP_001465110 
Protein GI157158623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00183874 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAC TTAAAGAGCC GTTTGCCACG TTATGGCGCG GCAAAGATCC TTTTGAGGAA 
GTTAAAACCT TGCAGGGTGA GGTATTTCGT GAACTGGAAA CTCGCCGTAC TCTGCGCTTT
GAAATGGCGG GCAAAAGCTA TTTTCTCAAA TGGCATCGCG GCACGACCCT GAAAGAGATA
ATCAAAAATT TACTCTCATT GCGGATGCCA GTATTAGGCG CAGACCGCGA ATGGAATGCG
ATTCATCGAC TGCGGGATGT CGGCGTTGAT ACTATGTATG GGGTGGCATT CGGCGAAAAA
GGCATGAATC CGCTGACCAG AACCTCGTTT ATTATTACCG AAGATCTGAC ACCAACCATA
AGTCTGGAAG ATTACTGTGC TGATTGGGCG ACTAACCCTC CAGATGTTCG TGTAAAGCGT
ATGCTTATTA AGCGTGTCGC GACGATGGTG CGCGATATGC ATGCTGCGGG CATTAACCAC
CGTGACTGTT ATATCTGTCA TTTCCTGCTG CACTTGCCTT TTTCCGGTAA GGAAGAGGAG
TTAAAAATTT CGGTAATTGA CCTACACCGG GCGCAGCTTC GCACGCGCGT TCCACGTCGT
TGGCGCGATA AAGATCTTAT AGGGCTTTAT TTTTCTTCAA TGAATATCGG CCTGACTCAG
CGGGATATCT GGCGGTTTAT GAAAGTGTAT TTTGCCGCCC CGCTTAAAGA CATTCTCAAG
CAGGAACAAG GACTGCTGTC GCAAGCAGAA GCAAAAGCCA CAAAAATCAG GGAAAGAACG
ATTCGAAAAT CGTTGTAA
 
Protein sequence
MVELKEPFAT LWRGKDPFEE VKTLQGEVFR ELETRRTLRF EMAGKSYFLK WHRGTTLKEI 
IKNLLSLRMP VLGADREWNA IHRLRDVGVD TMYGVAFGEK GMNPLTRTSF IITEDLTPTI
SLEDYCADWA TNPPDVRVKR MLIKRVATMV RDMHAAGINH RDCYICHFLL HLPFSGKEEE
LKISVIDLHR AQLRTRVPRR WRDKDLIGLY FSSMNIGLTQ RDIWRFMKVY FAAPLKDILK
QEQGLLSQAE AKATKIRERT IRKSL