Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4122 |
Symbol | rfaD |
ID | 5589144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4111897 |
End bp | 4112829 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640927741 |
Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
Protein accession | YP_001465101 |
Protein GI | 157156802 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.114529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATCG TTACCGGCGG CGCGGGCTTT ATCGGCAGCA ACATCGTTAA AGCCCTGAAT GATAAAGGCA TCACCGATAT TCTGGTGGTG GACAACCTGA AAGACGGCAC CAAGTTTGTG AACCTGGTGG ATCTGAATAT CGCAGACTAT ATGGATAAGG AAGACTTCCT GATCCAGATT ATGGCTGGCG AAGAGTTCGG CGATGTCGAA GCGATTTTCC ACGAAGGCGC GTGCTCTTCC ACCACCGAGT GGGACGGCAA GTATATGATG GATAACAACT ATCAATACTC CAAGGAGCTG CTGCACTACT GCCTGGAGCG TGAAATCCCG TTCCTGTACG CTTCTTCCGC AGCCACCTAC GGCGGACGCA CCTCCGACTT TATTGAATCC CGCGAGTACG AAAAACCGTT GAACGTCTAC GGTTACTCAA AATTCCTGTT TGATGAATAT GTTCGCCAAA TCCTGCCGGA AGCGAACTCG CAGATTGTTG GCTTCCGCTA TTTCAACGTT TATGGACCGC GTGAAGGCCA TAAAGGCAGC ATGGCGAGCG TCGCTTTCCA TCTCAACACC CAGCTTAATA ACGGTGAATC ACCGAAGCTG TTCGAAGGTA GCGAGAACTT TAAACGCGAC TTCGTCTATG TTGGCGATGT GGCAGATGTA AACCTGTGGT TCCTGGAAAA TGGCGTTTCC GGCATCTTCA ACCTCGGCAC CGGTCGTGCG GAATCCTTCC AGGCTGTAGC TGATGCTACG CTGGCTTATC ACAAGAAAGG CCAGATCGAA TACATTCCGT TCCCGGATAA GCTGAAAGGC CGCTACCAGG CGTTCACTCA GGCAGATCTG ACAAATCTGC GCGCGGCGGG TTACGACAAA CCGTTCAAAA CCGTTGCTGA AGGTGTAACG GAATACATGG CCTGGCTGAA TCGCGACGCA TAA
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Protein sequence | MIIVTGGAGF IGSNIVKALN DKGITDILVV DNLKDGTKFV NLVDLNIADY MDKEDFLIQI MAGEEFGDVE AIFHEGACSS TTEWDGKYMM DNNYQYSKEL LHYCLEREIP FLYASSAATY GGRTSDFIES REYEKPLNVY GYSKFLFDEY VRQILPEANS QIVGFRYFNV YGPREGHKGS MASVAFHLNT QLNNGESPKL FEGSENFKRD FVYVGDVADV NLWFLENGVS GIFNLGTGRA ESFQAVADAT LAYHKKGQIE YIPFPDKLKG RYQAFTQADL TNLRAAGYDK PFKTVAEGVT EYMAWLNRDA
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