Gene EcE24377A_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4082 
Symbol 
ID5590282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4065584 
End bp4066720 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content51% 
IMG OID640927702 
Productmembrane fusion protein family protein 
Protein accessionYP_001465062 
Protein GI157156525 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAC TGATTATTTT AACCTATATG GCTTTCGCAT GGGCAATGTT TAAGATCTTC 
AAAATTCCTG TAAATAAATG GACCATTCCC ACCGCGGCCC TGGGTGGCAT ATTTATTGTC
AGCGGTTTAA TTCTGTTAAT GAACTATAAC CATCCGTATA CCTTCAAAGC GCAAAAAGCG
GTTATTTCTA TTCCTGTTGT CCCACAGGTG ACAGGCGTGG TGATCGAAGT GACGGATAAG
AAAAATACGC TGATTAAAAA AGGTGAGGTG CTATTTCGAC TGGACCCGAC GCGTTATCAG
GCGCGGGTGG ATCGGCTGAT GGCGGATATC GTTACCGCAG AACATAAACA GCGGGCGTTG
GGCGCAGAGT TAGATGAGAT GGCGGCGAAT ACTCAGCAGG CAAAGGCCAC GCGGGATAAA
TTCGCTAAAG AGTATCAGCG TTACGCACGC GGCAGCCAGG CGAAAGTAAA CCCGTTTTCA
GAACGCGATA TTGATGTGGC GCGGCAAAAT TATCTGGCGC AGGAAGCCTC CGTAAAGTCA
TCGGCGGCGG AACAAAAACA GATCCAGAGC CAGCTGGATA GCCTGGTGTT GGGTGAACAT
TCTCAAATCG CCAGCCTGAA AGCGCAGCTC GCGGAAGCAA AATATAACCT TGAGCAGACG
ATAGTGCGTG CGCCGAGCGA TGGTTATGTG ACCCAGGTGC TGATTCGTCC GGGTACCTAT
GCCGCGTCGC TGCCGCTACG TCCGGTGATG GTGTTTATAC CCGATCAGAA ACGACAAATT
GTGGCGCAGT TCCGTCAGAA CTCCTTGCTG CGACTGGCCC CTGGCGATGA TGCGGAAGTG
GTATTTAACG CTCTGCCAGG TAAGGTATTC AGCGGCAAGC TGGCAGCCAT TAGTCCAGCT
GTTCCCGGCG GAGCTTATCA GTCGACCGGC ACCTTACAGA CGTTAAACAC AGCGCCGGGT
TCAGATGGCG TTATCGCGAC CATTGAACTG GATGAGCACA CTGATTTGAG CGCTTTACCA
GACGGTATTT ACGCCCAGGT GGCGGTCTAC TCTGATCATT TCAGCCATGT CTCGGTGATG
CGCAAAGTGC TGTTACGCAT GACCAGTTGG GTGCATTACC TTTATCTCGA TCATTAA
 
Protein sequence
MDLLIILTYM AFAWAMFKIF KIPVNKWTIP TAALGGIFIV SGLILLMNYN HPYTFKAQKA 
VISIPVVPQV TGVVIEVTDK KNTLIKKGEV LFRLDPTRYQ ARVDRLMADI VTAEHKQRAL
GAELDEMAAN TQQAKATRDK FAKEYQRYAR GSQAKVNPFS ERDIDVARQN YLAQEASVKS
SAAEQKQIQS QLDSLVLGEH SQIASLKAQL AEAKYNLEQT IVRAPSDGYV TQVLIRPGTY
AASLPLRPVM VFIPDQKRQI VAQFRQNSLL RLAPGDDAEV VFNALPGKVF SGKLAAISPA
VPGGAYQSTG TLQTLNTAPG SDGVIATIEL DEHTDLSALP DGIYAQVAVY SDHFSHVSVM
RKVLLRMTSW VHYLYLDH