Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4080 |
Symbol | sgbE |
ID | 5588694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4062707 |
End bp | 4063402 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640927699 |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_001465059 |
Protein GI | 157159253 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAGC AACTGAAAGC CGACGTGCTG GCGGCAAATC TGGCGCTTCC CGCTCACCAT CTGGTGACGT TCACCTGGGG CAATGTCAGC GCGGTAGACG ACACGCGGCA ATGGATGGTA ATCAAACCTT CCGGCGTCGA ATACGACGTG ATGACCGCCG ACGATATGGT GGTGGTTGAG ATAGCCAGCG GTAAGGCGGT GGAAGGTAGC AAAAAGCCCT CGTCCGATAC GCCAACGCAT CTGGCACTTT ACCGTCGCTA TGCCGAAATT GGTGGCATTG TGCATACCCA CTCGCGCCAC GCCACCATCT GGTCACAGGC CGGGCTGGAT CTCCCCGCCT GGGGCACCAC GCACGCTGAT TACTTCTATG GTGCCATCCC CTGCACACGC CTGATGACCG CAGAGGAGAT CAACGGCGAG TATGAATACC AGACCGGCGA AGTGATCATT GAAACTTTCG AAGAACGCGG CAGGAGTCCG GCACAAATCC CGGCGGTACT GGTACATTCT CACGGCCCGT TCGCCTGGGG AAAAAATGCC GCCGATGCGG TGCATAACGC CGTGGTGCTG GAAGAGTGTG CCTATATGGG CCTGTTCTCG CGCCAGCTTG CGCCGCAGCT CCCTGCGATG CAAAACGAAC TGCTGGATAA ACACTACCTG CGTAAGCATG GAGACAATGC CTATTACGGG CAGTAA
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Protein sequence | MLEQLKADVL AANLALPAHH LVTFTWGNVS AVDDTRQWMV IKPSGVEYDV MTADDMVVVE IASGKAVEGS KKPSSDTPTH LALYRRYAEI GGIVHTHSRH ATIWSQAGLD LPAWGTTHAD YFYGAIPCTR LMTAEEINGE YEYQTGEVII ETFEERGRSP AQIPAVLVHS HGPFAWGKNA ADAVHNAVVL EECAYMGLFS RQLAPQLPAM QNELLDKHYL RKHGDNAYYG Q
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