Gene EcE24377A_4043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4043 
Symbol 
ID5589195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4026346 
End bp4027044 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content50% 
IMG OID640927663 
Producthypothetical protein 
Protein accessionYP_001465023 
Protein GI157156251 
COG category[N] Cell motility 
COG ID[COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATAA AAAAAAGCGG TGGTCGCTGG CAGCTAAGCC TGCTGGCGAG CGTGGTAATC 
AGTGCCTTTT TTCTCAACAC AGCTTACGCC TGGCAACAAG AATATATCGT TGATACGCAA
CCCGGACATT CCACAGAGCG TTACACCTGG GATAGTGATC ATCAACCTGA TTACAACGAT
ATTTTGTCGC AACGTATTCA AAGTAGCCAA AGGGCGCTGG GACTGGAAGT CAATCTGGCG
GAAGAAACTC CTGTGGATGT GACCAGCAGT ATGAGTATGG GCTGGAATTT TCCTTTATAT
GAACAGGTTA CAACCGGCCC GGTCGCGGCA TTACATTACG ATGGCACAAC CACCTCGATG
TATAACGAGT TTGGCGACAG TACTACCACG CTGACCGATC CGTTATGGCA TGCCAGCGTG
AGTAGCTTAG GCTGGCGTGT TGACTCCCGG CTTGGCGATC TCCGACCCTG GGCGCAAATC
AGCTATAACC AGCAATTTGG CGAGAATATC TGGAAGGCGC AATCAGGCCT GAGCCGGATG
ACGGCGACAA ACCAGAACGG CAACTGGCTG GATGTCACCG TAGGCGCTGA TATGTTGCTC
AATCAAAATA TTGCCGCCTA TGCCGCGCTA ACTCAGGCAG AAAATACCAC TAATAATAGC
GACTATCTGT ATACGATGGG GGTTAGCGCC AGATTTTAA
 
Protein sequence
MIIKKSGGRW QLSLLASVVI SAFFLNTAYA WQQEYIVDTQ PGHSTERYTW DSDHQPDYND 
ILSQRIQSSQ RALGLEVNLA EETPVDVTSS MSMGWNFPLY EQVTTGPVAA LHYDGTTTSM
YNEFGDSTTT LTDPLWHASV SSLGWRVDSR LGDLRPWAQI SYNQQFGENI WKAQSGLSRM
TATNQNGNWL DVTVGADMLL NQNIAAYAAL TQAENTTNNS DYLYTMGVSA RF