Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4042 |
Symbol | |
ID | 5588265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4024909 |
End bp | 4026117 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640927662 |
Product | major facilitator family transporter |
Protein accession | YP_001465022 |
Protein GI | 157156915 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCTT CAAATTATCA GCGTACCCGC TGGCTGACAC TCATCGGTAC TATCATTACC CAGTTTGCAC TGGGGTCGGT TTATACCTGG AGCCTGTTTA ATGGCGCGCT TTCTGCCAAG CTGGATGCGC CGGTAAGCCA GGTCGCTTTC TCTTTCGGCT TGTTAAGTCT GGGGCTGGCA ATTTCGTCTT CTGTTGCGGG CAAATTGCAG GAACGTTTTG GCGTTAAACG CGTCACCATG GCTTCCGGCA TTTTGCTGGG ATTAGGCTTC TTCCTGACCG CGCATTCCAA CAACCTGATG ATGCTGTGGT TAAGCGCCGG TGTGCTGGTC GGTCTGGCGG ATGGCGCGGG TTACCTGCTG ACGCTCTCTA ACTGCGTGAA GTGGTTCCCG GAGCGTAAAG GTCTGATCTC CGCGTTCGCT ATCGGTTCTT ATGGTCTGGG TAGCCTGGGT TTCAAATTTA TCGACACGCA GCTGCTCGAA ACGGTGGGTT TGGAAAAAAC ATTTGTGATT TGGGGAGCGA TTGCGCTGGT GATGATTGTT TTCGGCGCAA CGTTAATGAA AGACGCACCA AAACAGGAAG TGAAAACCAG CAATGGTGTG GTGGAGAAAG ATTACACGCT GGCAGAGTCG ATGCGTAAAC CGCAGTACTG GATGTTAGCG GTAATGTTCC TGACTGCCTG CATGAGCGGC CTGTACGTGA TTGGGGTAGC GAAAGATATC GCCCAAAGTC TGGCACACCT TGATGTGGTT TCCGCAGCCA ATGCAGTAAC GGTTATTTCC ATCGCCAACC TTTCAGGTCG TCTGGTGCTG GGGATACTGT CTGACAAAAT TGCCCGTATC CGTGTTATCA CCATTGGTCA GGTGATTTCG CTGGTGGGTA TGGCGGCCCT GCTGTTTGCA CCATTAAATG CAGTGACGTT CTTTGCAGCG ATTGCCTGCG TGGCATTTAA CTTTGGCGGC ACTATTACCG TCTTTCCGTC ACTGGTCAGT GAGTTCTTCG GCCTCAATAA CCTGGCGAAA AACTACGGTG TGATTTACCT CGGTTTCGGT ATCGGTAGCA TTTTTGGTTC GATTATCGCC TCACTGTTTG GCGGTTTCTA TGTGACCTTC TACGTGATTT TCGCCCTGCT GATTCTGTCA TTGGCGCTTT CTACGACGAT TCGTCAGCCA GAGCAGAAAA TGTTGCGTGA GGCGCATGGC TCCCTTTAA
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Protein sequence | MTPSNYQRTR WLTLIGTIIT QFALGSVYTW SLFNGALSAK LDAPVSQVAF SFGLLSLGLA ISSSVAGKLQ ERFGVKRVTM ASGILLGLGF FLTAHSNNLM MLWLSAGVLV GLADGAGYLL TLSNCVKWFP ERKGLISAFA IGSYGLGSLG FKFIDTQLLE TVGLEKTFVI WGAIALVMIV FGATLMKDAP KQEVKTSNGV VEKDYTLAES MRKPQYWMLA VMFLTACMSG LYVIGVAKDI AQSLAHLDVV SAANAVTVIS IANLSGRLVL GILSDKIARI RVITIGQVIS LVGMAALLFA PLNAVTFFAA IACVAFNFGG TITVFPSLVS EFFGLNNLAK NYGVIYLGFG IGSIFGSIIA SLFGGFYVTF YVIFALLILS LALSTTIRQP EQKMLREAHG SL
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