Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4018 |
Symbol | bcsC |
ID | 5590269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3997563 |
End bp | 4000985 |
Gene Length | 3423 bp |
Protein Length | 1140 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640927639 |
Product | cellulose synthase subunit BcsC |
Protein accession | YP_001465000 |
Protein GI | 157154865 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGATGG TCGAGGCAGC ACCAACCGCT CAGCAACAGT TGCTGGAGCA AGTTCGGTTA GGCGAAGCGA CCCATCGTGA AGATCTGGTG CAACAGTCGT TATATCGGCT GGAACTTATT GATCCGAATA ACCCGGACGT CGTTGCCGCC CGTTTCCGTT CTTTGTTACG TCAGGGCGAT ATTGATGGCG CGCAAAAACA GCTCGATCGG CTGTCGCAGT TAGCGCCGAG TTCAAATGCG TATAAATCGT CGCGGACTAC GATGCTACTT TCCACGCCGG ATGGTCGTCA GGCACTGCAA CAGGCACGAT TGCAGGCGAC GACCGGTCAT GCAGAAGAAG CTGTGGCGAG TTACAACAAA CTGTTCAACG GTGCGCCGCC GGAAGGTGAC ATTGCTGTCG AGTACTGGAG TACGGTGGCG AAAATTCCGG CTCGCCGTGG CGAAGCGATT AATCAGTTAA AACGCATCAA TGCGGATGCA CCGGGCAATA CGGGCCTGCA AAACAATCTG GCGCTATTGC TGTTTAGTAG CGATCGCCGT GACGAAGGTT TTGCCGTCCT GGAACAGATG GCAAAATCGA ACGCCGGGCG CGAAGGGGCC TCTAAAATCT GGTACGGGCA GATTAAAGAC ATGCCCGTCA GTGATGCCAG TGTGTCGGCG CTGAAAAAAT ATCTCTCGAT CTTTAGTGAT GGCGATAGCG TGGCGGCTGC GCAATCGCAA CTGGCAGAAC AGCAAAAACA GCTGGCCGAT CCTGCTTTCC GCGCTCGTGC GCAAGGTTTA GCGGCGGTGG ACTCTGGTAT GGCGGGTAAA GCCATTCCCG AACTACAACA GGCGGTGCGG GCGAACCCGA AAGACAGTGA AGCTCTGGGG GCGCTGGGCC AGGCGTATTC TCAGAAAGGC GATCGCGCCA ATGCAGTGGC GAATCTGGAA AAAGCCCTCG CACTGGACCC GCACAGCAGC AACAACGACA AATGGAACAG TCTGCTGAAA GTAAACCGCT ACTGGCTGGC GATCCAGCAG GGCGATGCTG CGCTGAAAGC CAATAATCCT GACCGGGCAG AACGCCTGTT CCAGCAGGCG CGTAATGTCG ATAACACCGA CAGTTATGCA GTGCTGGGGC TGGGCGATGT GGCGATGGCG CGAAAAGATT ATCCCGCCGC CGAACGTTAT TATCAGCAGA CCTTGCGTAT GGACAGCGGC AACACTAACG CCGTGCGCGG GCTGGCAAAT ATTTACCGCC AGCAATCGCC AGAAAAAGCT GAAGCGTTTA TCGCCTCGCT CTCTGCCAGT CAGCGGCGTA GCATTGATGA TATCGAACGC AGCCTGCAAA ACGACCGTCT GGCACAGCAG GCAGAGGCAC TGGAAAACCA GGGCAAATGG GCGCAGGCGG CAGCACTTCA GCGGCAACGA CTGGCGCTGG ACCCCGGCAG CGTATGGATT ACTTACCGAC TTTCGCAGGA TCTCTGGCAG GCCGGACAAC GCAGCCAGGC CGATACGTTA ATGCGCAATC TGGCGCAGCA GAAGCCGAAC GACCCGGAGC AGGTTTACGC TTACGGGCTG TACCTCTCTG GTCATGACCA CGACAGAGCG GCGCTGGCGC ATATCAACAG CCTGCCGCGC GCGCAGTGGA ACAGCAATAT TCAGGAGCTG GTTAATCGAC TGCAAAGCGA TCAGGTGCTG GAAACCGCTA ATCGCCTGCG AGAAAGCGGC AAAGAAGCTG AAGCGGAAGC GATGCTGCGT CAGCAACCAC CTTCCACGCG TATTGACCTC ACGCTGGCTG ACTGGGCGCA GCAGCGACGT GATTACACCG CCGCCCGCGC TGCATATCAG AATGTCCTGA CGCGGGAGCC AACTAACGCC GATGCCATTC TGGGGCTGAC GGAAGTGGAT ATTGCTGCCG GTGACACAGC GGCGGCACGT AGCCAGCTGG CGAAACTGCC CGCTACCGAT AACGCCTCGC TGAACACACA GCGGCGCGTG GCGCTGGCGC AGGCGCAGCT TGGAGATACC GCAGCGGCGC AGCAGACGTT TAATAAGTTG ATCCCGCAGG CAAAATCTCA GCCACCGTCG ATGGAAAGCG CGATGGTGCT GCGCGACGGT GCGAAGTTTG AAGCGCAGGC GGGCGATCCA AAGCAGGCGC TGGAAACCTA CAAAGACGCC ATGGTCGCAT CCGGTGTGAC TACGACGCGT CCGCAGGATA ACGACACATT CACCCGACTG ACCCGTAACG ACGAGAAAGA TGACTGGCTG AAACGCGGCG TGCGCAGCGA TGCGGCGGAC CTCTATCGCC AGCAGGATCT TAACGTCACC CTTGAGCATG ATTATTGGGG ATCGAGCGGC ACCGGTGGTT ACTCCGATCT GAAAGCGCAC ACCACTATGT TGCAGGTGGA CGCGCCGTAT TCTGACGGGC GGATGTTCTT TCGCAGTGAT TTCGTCAATA TGAACGTCGG CAGTTTCTCC ACTAATGCCG ATGGTAAATG GGATGATAAC TGGGGCACCT GTACATTACA GGACTGTAGC GGCAACCGCA GCCAGTCGGA TTCCGGTGCC AGCGTGGCGG TCGGCTGGCG AAATGACGTC TGGAGCTGGG ATATCGGCAC CACGCCGATG GGCTTCAACG TGGTGGATGT GGTCGGCGGC ATCAGTTACA GCGATGATAT CGGGCCGCTG GGTTACACCG TTAACGCCCA CCGTCGGCCC ATCTCCAGTT CTTTGCTGGC CTTTGGTGGG CAAAAAGACT CCCCGAGCAA TACCGGGAAA AAATGGGGCG GTGTGCGTGC CGACGGCGTG GGGCTAAGCC TGAGCTACGA TAAAGGTGAA GCAAACGGCG TCTGGGCATC GCTTAGTGGC GACCAGTTAA CCGGTAAAAA TGTCGAAGAT AACTGGCGCG TGCGCTGGAT GACGGGCTAT TACTATAAGG TCATCAACCA GAACAATCGC CGCGTCACAA TCGGCCTGAA CAACATGATC TGGCATTACG ACAAAGACCT GAGTGGCTAC TCACTCGGTC AGGGCGGTTA CTACAGCCCG CAGGAATACC TGTCGTTTGC CATACCGGTG ATGTGGCGGG AGCGCACGGA AAACTGGTCG TGGGAGCTGG GGGCGTCTGG CTCGTGGTCG CATTCACGCA CCAAAACCAT GCCGCGTTAT CCGCTGATGA ATCTGATCCC GACCGACTGG CAGGAAGAAG CTGCGCGGCA ATCCAACGAT GGCGGCAGCA GTCAGGGCTT CGGCTACACG GCGCGGGCAT TACTTGAACG ACGTGTTACT TCCAACTGGT TTGTTGGCAC GGCAATTGAT ATCCAGCAGG CGAAAGATTA CGCACCCAGC CATTTCCTGC TCTACGTACG TTATTCCGCC GCCGGATGGC AGGGTGACAT GGATTTACCG CCGCAGCCGC TGATACCTTA CGCCGACTGG TAA
|
Protein sequence | MPMVEAAPTA QQQLLEQVRL GEATHREDLV QQSLYRLELI DPNNPDVVAA RFRSLLRQGD IDGAQKQLDR LSQLAPSSNA YKSSRTTMLL STPDGRQALQ QARLQATTGH AEEAVASYNK LFNGAPPEGD IAVEYWSTVA KIPARRGEAI NQLKRINADA PGNTGLQNNL ALLLFSSDRR DEGFAVLEQM AKSNAGREGA SKIWYGQIKD MPVSDASVSA LKKYLSIFSD GDSVAAAQSQ LAEQQKQLAD PAFRARAQGL AAVDSGMAGK AIPELQQAVR ANPKDSEALG ALGQAYSQKG DRANAVANLE KALALDPHSS NNDKWNSLLK VNRYWLAIQQ GDAALKANNP DRAERLFQQA RNVDNTDSYA VLGLGDVAMA RKDYPAAERY YQQTLRMDSG NTNAVRGLAN IYRQQSPEKA EAFIASLSAS QRRSIDDIER SLQNDRLAQQ AEALENQGKW AQAAALQRQR LALDPGSVWI TYRLSQDLWQ AGQRSQADTL MRNLAQQKPN DPEQVYAYGL YLSGHDHDRA ALAHINSLPR AQWNSNIQEL VNRLQSDQVL ETANRLRESG KEAEAEAMLR QQPPSTRIDL TLADWAQQRR DYTAARAAYQ NVLTREPTNA DAILGLTEVD IAAGDTAAAR SQLAKLPATD NASLNTQRRV ALAQAQLGDT AAAQQTFNKL IPQAKSQPPS MESAMVLRDG AKFEAQAGDP KQALETYKDA MVASGVTTTR PQDNDTFTRL TRNDEKDDWL KRGVRSDAAD LYRQQDLNVT LEHDYWGSSG TGGYSDLKAH TTMLQVDAPY SDGRMFFRSD FVNMNVGSFS TNADGKWDDN WGTCTLQDCS GNRSQSDSGA SVAVGWRNDV WSWDIGTTPM GFNVVDVVGG ISYSDDIGPL GYTVNAHRRP ISSSLLAFGG QKDSPSNTGK KWGGVRADGV GLSLSYDKGE ANGVWASLSG DQLTGKNVED NWRVRWMTGY YYKVINQNNR RVTIGLNNMI WHYDKDLSGY SLGQGGYYSP QEYLSFAIPV MWRERTENWS WELGASGSWS HSRTKTMPRY PLMNLIPTDW QEEAARQSND GGSSQGFGYT ARALLERRVT SNWFVGTAID IQQAKDYAPS HFLLYVRYSA AGWQGDMDLP PQPLIPYADW
|
| |