| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4001 |
|---|
| Symbol | gadW |
|---|
| ID | 5587795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3975701 |
|---|
| End bp | 3976429 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640927623 |
|---|
| Product | transcriptional regulator GadW |
|---|
| Protein accession | YP_001464984 |
|---|
| Protein GI | 157157215 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATG TCTGCTCGGT GATCCTCATT CGTCGTTCAT TCGATATTTA TCATGAACAG
CATAAAATAT CGCTGCATAA CGAGAGTATC GTGCTGCTGG AGAAAAATTT GGCAGACGAT
TTTGCGTTTT GTTCACCGGA TACGCGACGA CTGGATATCG ATGAGCTGAC AGTTTGCCAT
TACTTACAAA ATATTCGTCA GCTACCACGC AATTTAGGGT TACATAGCAA AGACCGTCTA
TTAATTAACC AGTTACCCCC CATGCCGCTG GTGACGGCGA TTTTTGATAG CTTCAATGAA
TCCGGGGTAA ATTCACCGAT ACTGAGCAAT ATGCTCTACC TTTCCTGTTT ATCGATGTTT
TCTCATAAGA AAGAACTGAT CCCCTTACTT TTCAATAGCA TCAGCACTGT TTCAGGAAAA
GTTGAACGCC TTATTAGCTT TGATATCGCC AAACGTTGGT ATCTGCGCGA TATCGCGGAA
AGAATGTATA CCAGCGAGAG TCTCATCAAA AAAAAGTTGC AGGATGAAAA TACCTGTTTC
AGTAAAATAT TACTCGCTTC CAGGATGTCG ATGGCCAGAC GATTACTCGA GTTACGTCAA
ATTCCTCTGC ATACTATTGC AGAAAAATGT GGCTATAGCA GTACGTCGTA CTTTATAAAC
ACATTTCGAC AATATTATGG TGTAACGCCA CATCAGTTTG CGCAACATTC GCCAGGTACC
TTTTCCTGA
|
|---|
| Protein sequence | MTHVCSVILI RRSFDIYHEQ HKISLHNESI VLLEKNLADD FAFCSPDTRR LDIDELTVCH
YLQNIRQLPR NLGLHSKDRL LINQLPPMPL VTAIFDSFNE SGVNSPILSN MLYLSCLSMF
SHKKELIPLL FNSISTVSGK VERLISFDIA KRWYLRDIAE RMYTSESLIK KKLQDENTCF
SKILLASRMS MARRLLELRQ IPLHTIAEKC GYSSTSYFIN TFRQYYGVTP HQFAQHSPGT
FS
|
|---|
| |