Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3980 |
Symbol | prlC |
ID | 5586793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3954672 |
End bp | 3956714 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640927602 |
Product | oligopeptidase A |
Protein accession | YP_001464963 |
Protein GI | 157159202 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAATC CGTTACTGAC TCCCTTTGAA TTGCCTCCGT TTTCTAAAAT TCTCCCGGAA CATGTCGTTC CAGCCGTGAC TAAGGCGCTG AACGACTGCC GCGAAAATGT GGAGCGCGTA GTAGCGCAAG GAGCACCGTA CACCTGGGAA AATCTCTGCC AGCCGTTGGC GGAAGTGGAC GATGTGCTGG GGCGTATCTT CTCCCCGGTC AGCCACCTGA ACTCGGTGAA AAATAGCCCG GAACTGCGTG AAGCGTACGA ACAAACCCTG CCGCTGCTGT CGGAATACAG CACCTGGGTA GGGCAACATG AAGGGCTGTA TAAAGCGTAT CGCGACCTGC GCGATGGCGA TCATTACGCC ACGCTGAACA CGGCTCAGAA AAAAGCGGTT GATAACGCAC TGCGCGACTT CGAACTCTCT GGCATCGGTC TGCCAATAGA GAAACAACAA CGCTACGGTG AGATTGCCAC TCGTCTTTCC GAGCTGGGCA ACCAGTACAG CAACAACGTC CTCGATGCGA CGATGGGCTG GACCAAACTC GTTACCGACG AAGCGGAGCT GGCGGGGATG CCTGAAAGCG CGCTGGCTGC GGCAAAAGCC CAGGCCGAAG CGAAAGAGCT GGAAGGCTAC CTGCTGACGC TGGATATCCC AAGCTACCTG CCGGTAATGA CCTACTGCGA CAACCAGGCC TTGCGTGAAG AGATGTATCG CGCTTACAGC ACCCGCGCTT CCGATCAAGG CCCGAACGCC GGTAAGTGGG ATAACAGCAA GGTGATGGAA GAGATCCTCG CTCTGCGTCA CGAACTGGCG CAACTGCTGG GCTTTGAAAA CTACGCCTTT AAATCCCTTG CTACTAAAAT GGCAGAAAAC CCGCAGCAGG TGCTGGATTT CTTAACCGAT CTGGCAAAAC GCGCGCGTCC GCAAGGCGAA AAAGAGCTGG CACAACTGCG CGCCTTCGCC AAAGCGGAAT TTGGCGTCGA TGAGTTGCAG CCGTGGGATA TCGCGTACTA CAGCGAAAAA CAAAAACAGC ACCTCTACAG CATCAGTGAC GAACAGCTGC GTCCGTACTT CCCGGAAAAC AAAGCGGTTA ACGGCCTGTT TGAAGTGGTG AAACGTATTT ACGGCATCAC CGCTAAAGAG CGTAAAGATG TTGATGTCTG GCATCCGGAT GTACGTTTCT TCGAACTGTA TGACGAAAAT AACGAACTGC GCGGCAGCTT CTACCTCGAT CTGTATGCCC GTGAAAACAA GCGCGGCGGG GCGTGGATGG ATGACTGCGT AGGCCAGATG CGTAAAGCTG ATGGTTCGCT GCAAAAACCG GTCGCGTATT TGACTTGTAA CTTCAACCGC CCGGTAAATG GTACACCGGC GCTGTTCACT CACGACGAAG TGATCACCCT GTTCCACGAG TTCGGTCACG GCCTGCACCA TATGCTGACC CGCATCGAAA CCGCTGGTGT TTCCGGTATC AGCGGTGTGC CGTGGGATGC GGTCGAACTG CCGAGTCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAGG CGCTGGCGTT TATCTCCGGT CACTATGAAA CCGGCGAACC GCTGCCGAAA GAGTTGCTGG ATAAAATGCT GGCGGCGAAG AACTACCAGG CGGCGCTGTT TATTCTGCGT CAGCTGGAGT TCGGCCTGTT TGATTTCCGC CTTCATGCTG AGTTCCGCCC GGATCAGGGG GCAAAAATCC TCGAAACTCT GGCAGAAATC AAGAAACTGG TTGCCGTGGT GCCATCTCCG TCCTGGGGCC GTTTCCCGCA CGCTTTCAGC CATATTTTCG CCGGTGGTTA TGCGGCAGGT TACTACAGCT ACCTGTGGGC TGACGTACTG GCGGCAGATG CTTTCTCGCG CTTTGAGGAA GAGGGCATTT TCAACCGTGA AACCGGGCAG TCGTTCCTCG ACAACATTCT GAGCCGTGGC GGTTCAGAAG AGCCGATGGA TCTGTTCAAA CGCTTCCGTG GTCGTGAACC GCAGCTGGAT GCGATGCTGG AGCATTACGG CATTAAGGGC TGA
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Protein sequence | MTNPLLTPFE LPPFSKILPE HVVPAVTKAL NDCRENVERV VAQGAPYTWE NLCQPLAEVD DVLGRIFSPV SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYKAY RDLRDGDHYA TLNTAQKKAV DNALRDFELS GIGLPIEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL VTDEAELAGM PESALAAAKA QAEAKELEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS TRASDQGPNA GKWDNSKVME EILALRHELA QLLGFENYAF KSLATKMAEN PQQVLDFLTD LAKRARPQGE KELAQLRAFA KAEFGVDELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN KAVNGLFEVV KRIYGITAKE RKDVDVWHPD VRFFELYDEN NELRGSFYLD LYARENKRGG AWMDDCVGQM RKADGSLQKP VAYLTCNFNR PVNGTPALFT HDEVITLFHE FGHGLHHMLT RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK NYQAALFILR QLEFGLFDFR LHAEFRPDQG AKILETLAEI KKLVAVVPSP SWGRFPHAFS HIFAGGYAAG YYSYLWADVL AADAFSRFEE EGIFNRETGQ SFLDNILSRG GSEEPMDLFK RFRGREPQLD AMLEHYGIKG
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