| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3968 |
|---|
| Symbol | |
|---|
| ID | 5588680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3938735 |
|---|
| End bp | 3941470 |
|---|
| Gene Length | 2736 bp |
|---|
| Protein Length | 911 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640927590 |
|---|
| Product | ABC transporter, ATP binding protein |
|---|
| Protein accession | YP_001464951 |
|---|
| Protein GI | 157155368 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATC TGGAACTGGT TCCCGTCCCG CCTGTCGCGC AACTGGCGGG CGTGAGCCAG
CATTATGGAA AAACCGTTGC GCTGAACAAT ATCACACTCG ATATTCCGGC CCGTTGCATG
GTCGGGCTGA TTGGCCCGGA CGGCGTCGGG AAGTCGAGCT TGTTGTCGTT GATTTCCGGT
GCCCGCGTCA TTGAACAGGG CAATGTGATG GTGCTGGGCG GCGATATGCG CGACCCGAAG
CATCGCCGCG ACGTCTGCCC GCGCATCGCC TGGATGCCGC AGGGGCTGGG CAAAAATCTC
TACCACACCT TATCGGTGTA TGAAAATGTC GATTTTTTCG CTCGCTTGTT CGGTCACGAT
AAAGCGGAGC GGGAAGTCCG AATTAATGAG CTGCTGACCA GCACCGGGTT AGCACCGTTT
CGCGATCGTC CGGCAGGTAA ACTCTCCGGC GGGATGAAGC AAAAACTGGG GCTGTGCTGC
GCGTTAATCC ACGACCCGGA ACTGTTGATC CTTGATGAGC CAACAACGGG GGTTGACCCG
CTCTCCCGCG CCCAGTTCTG GGATCTGATC GACAGTATTC GCCAGCGGCA GAGCAATATG
AGCGTGCTGG TCGCCACCGC CTATATGGAA GAGGCCGAAC GCTTCGACTG GCTGGTAGCG
ATGAATGCCG GAGAAGTGCT GGCAACTGGC AGCGCCGAAG AGCTGCGGCA GCAAACGCAA
AGCGCCACGC TGGAAGAGGC GTTTATAAAT CTGTTACCGC AAGCGCAACG CCAGGCGCAT
CAGGCGGTAG TGATCCCACC GTATCAACCT GAAAATGCAG AGATTGCCAT CGAAGCGCGC
GATCTGACCA TGCGTTTTGG TTCCTTCGTT GCCGTTGATC ACGTCAATTT CCGCATTCCA
CGCGGGGAGA TTTTTGGTTT TCTTGGATCG AACGGCTGCG GTAAATCCAC CACCATGAAA
ATGCTCACCG GACTGCTGCC CGCCAGCGAA GGTGAGGCGT GGCTGTTTGG GCAACCGGTT
GATCCAAAAG ATATCGATAC CCGCCGTCGG GTGGGCTATA TGTCGCAGGC GTTTTCGCTC
TATAACGAAC TCACCGTGCG GCAAAACCTT GAGTTACATG CCCGTTTGTT TCACATCCCG
GAAGCGGAAA TTCCCGCGCG AGTGGCTGAA ATGAGCGAGC GTTTTAAGCT CAACGACGTT
GAAGATGTTC TGCCGGAGTC ATTGCCGCTC GGCATTCGCC AGCGGCTTTC GCTGGCGGTG
GCGGTGATTC ATCGCCCGGA GATGTTAATC CTCGATGAAC CTACTTCTGG CGTCGATCCG
GTGGCGAGGG ATATGTTCTG GCAGTTGATG GTCGATCTCT CGCGCCAGGA CAAAGTAACC
ATTTTTATCT CCACCCACTT TATGAACGAA GCGGAACGTT GCGACCGCAT CTCACTGATG
CACGCCGGAA AAGTGCTCGC CAGCGGTACA CCGCAGGAAC TGGTTGAGAA ACGCGGAGCC
GCCAGTCTGG AAGAGGCATT TATCGCCTAT TTGCAGGAAG CGGCAGGACA GAGCAACGAA
GCCGAAGCGC CGCCCGTGAT ACACGACACC ACCCACGCGC CGCGTCAGGG ATTTAGCCTG
CGCCGTCTGT TTAGCTACAG CCGCCGCGAA GCACTGGAAC TGCGACGCGA TCCGGTACGT
TCGACGCTGG CGCTGATGGG AACAGTGATC CTGATGCTGA TAATGGGTTA CGGCATCAGT
ATGGATGTGG AAAACCTGCG CTTTGCGGTG CTCGACCGCG ACCAGACCGT CAGTAGCCAG
GCGTGGACGC TCAATCTCTC CGGTTCCCGT TACTTTATCG AACAGCCGCC GCTCACCAGT
TATGACGAGC TTGATCGTCG GATGCGTGCG GGCGATATAA CGGTGGCAAT TGAGATCCCT
CCCAATTTCG GGCGCGATAT CGCGCGTGGT ACGCCTGTGG AACTCGGCGT CTGGATCGAC
GGAGCGATGC CGAGCCGTGC CGAAACGGTA AAAGGTTACG TGCAGGCAAT GCACCAGAGC
TGGCTACAGG ATGTGGCGAG CCGACAATCC ACACCCGCCA GCCAAAGCGG GCTGATGAAT
ATTGAGACGC GCTATCGCTA TAACCCGGAC GTAAAAAGCC TGCCAGCGAT TGTTCCGGCG
GTGATCCCGC TTCTGCTGAT GATGATCCCG TCAATGCTAA GCGCCCTTAG CGTGGTGCGG
GAAAAAGAGC TTGGGTCGAT TATCAACCTT TACGTGACCC CCACCACGCG TAGTGAATTT
TTGCTTGGTA AACAGTTGCC ATACATCGCG CTGGGGATGC TGAACTTTTT CCTGCTCTGC
GGCCTGTCGG TGTTTGTGTT TGGCGTACCG CATAAAGGCA GTTTCCTGAC GCTCACCCTG
GCGGCGCTGC TGTATATCAT CATTGCCACC GGAATGGGGC TGCTGATCTC CACCTTTATG
AAAAGCCAGA TTGCCGCCAT TTTCGGAACG GCGATTATCA CGTTGATCCC GGCGACACAG
TTTTCCGGGA TGATCGATCC GGTAGCTTCG CTGGAAGGGC CTGGACGTTG GATCGGCGAG
GTTTACCCGA CCAGTCATTT TCTGACTATC GCCCGCGGAA CGTTCTCGAA AGCGCTGGAT
CTGACTGATT TGTGGCAACT TTTTATCCCG TTGCTGATAG CCATCCCGCT GGTGATGGGC
TTAAGTATCC TGCTGCTGAA AAAACAGGAG GGATGA
|
|---|
| Protein sequence | MTHLELVPVP PVAQLAGVSQ HYGKTVALNN ITLDIPARCM VGLIGPDGVG KSSLLSLISG
ARVIEQGNVM VLGGDMRDPK HRRDVCPRIA WMPQGLGKNL YHTLSVYENV DFFARLFGHD
KAEREVRINE LLTSTGLAPF RDRPAGKLSG GMKQKLGLCC ALIHDPELLI LDEPTTGVDP
LSRAQFWDLI DSIRQRQSNM SVLVATAYME EAERFDWLVA MNAGEVLATG SAEELRQQTQ
SATLEEAFIN LLPQAQRQAH QAVVIPPYQP ENAEIAIEAR DLTMRFGSFV AVDHVNFRIP
RGEIFGFLGS NGCGKSTTMK MLTGLLPASE GEAWLFGQPV DPKDIDTRRR VGYMSQAFSL
YNELTVRQNL ELHARLFHIP EAEIPARVAE MSERFKLNDV EDVLPESLPL GIRQRLSLAV
AVIHRPEMLI LDEPTSGVDP VARDMFWQLM VDLSRQDKVT IFISTHFMNE AERCDRISLM
HAGKVLASGT PQELVEKRGA ASLEEAFIAY LQEAAGQSNE AEAPPVIHDT THAPRQGFSL
RRLFSYSRRE ALELRRDPVR STLALMGTVI LMLIMGYGIS MDVENLRFAV LDRDQTVSSQ
AWTLNLSGSR YFIEQPPLTS YDELDRRMRA GDITVAIEIP PNFGRDIARG TPVELGVWID
GAMPSRAETV KGYVQAMHQS WLQDVASRQS TPASQSGLMN IETRYRYNPD VKSLPAIVPA
VIPLLLMMIP SMLSALSVVR EKELGSIINL YVTPTTRSEF LLGKQLPYIA LGMLNFFLLC
GLSVFVFGVP HKGSFLTLTL AALLYIIIAT GMGLLISTFM KSQIAAIFGT AIITLIPATQ
FSGMIDPVAS LEGPGRWIGE VYPTSHFLTI ARGTFSKALD LTDLWQLFIP LLIAIPLVMG
LSILLLKKQE G
|
|---|
| |