Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3930 |
Symbol | ugpA |
ID | 5590159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3907079 |
End bp | 3907966 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640927552 |
Product | glycerol-3-phosphate transporter permease |
Protein accession | YP_001464913 |
Protein GI | 157156372 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAT CCCGTCCGGT GTTCCGCTCG CGCTGGCTGC CTTATCTGCT GGTCGCGCCG CAGCTCATCA TCACCGTTAT CTTTTTTATC TGGCCTGCGG GCGAAGCGTT GTGGTACTCG CTACAAAGCG TCGATCCATT TGGTTTCTCC AGCCAGTTTG TCGGCCTGGA TAACTTCGTC GCGCTGTTTC ATGACAGCTA CTATATCGAC TCCTTCTGGA CGACGATAAA ATTCAGCACC TTTGTCACCG TCAGCGGTTT GCTGGTATCG CTGTTCTTTG CGGCGCTTGT GGAGTACATC GTGCGCGGCA GCCGTTTCTA TCAAACCTTA ATGCTGCTGC CGTATGCCGT GGCTCCCGCC GTTGCCGCCG TATTGTGGAT CTTCCTGTTT AACCCCGGTC GCGGGCTGAT CACCCATTTT CTCGCTGAGT TCGGCTACGA CTGGAACCAC GCGCAAAACA GCGGTCAGGC GATGTTTCTG GTGGTGTTTG CCTCGGTGTG GAAGCAAATC AGCTACAACT TTCTGTTCTT CTATGCCGCG CTGCAATCCA TTCCCCGTTC GTTGATCGAA GCCGCAGCTA TTGACGGCGC AGGGCCGATT CGCCGCTTCT TTAAGATTGC TCTGCCGCTT ATCGCTCCGG TGAGTTTCTT CCTGCTGGTG GTGAACCTGG TGTACGCCTT CTTCGACACC TTCCCGGTGA TCGACGCCGC CACGTCCGGC GGGCCGGTTC AGGCCACCAC GACGCTGATT TATAAGATCT ACCGCGAAGG CTTTACCGGA CTGGATCTGG CTTCGTCTGC CGCGCAGTCG GTGGTGTTGA TGTTCCTCGT CATCGTGCTG ACGGTGGTGC AGTTCCGCTA TGTTGAAAGC AAGGTGCGTT ACCAATGA
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Protein sequence | MSSSRPVFRS RWLPYLLVAP QLIITVIFFI WPAGEALWYS LQSVDPFGFS SQFVGLDNFV ALFHDSYYID SFWTTIKFST FVTVSGLLVS LFFAALVEYI VRGSRFYQTL MLLPYAVAPA VAAVLWIFLF NPGRGLITHF LAEFGYDWNH AQNSGQAMFL VVFASVWKQI SYNFLFFYAA LQSIPRSLIE AAAIDGAGPI RRFFKIALPL IAPVSFFLLV VNLVYAFFDT FPVIDAATSG GPVQATTTLI YKIYREGFTG LDLASSAAQS VVLMFLVIVL TVVQFRYVES KVRYQ
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