Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3858 |
Symbol | damX |
ID | 5590549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3830707 |
End bp | 3831984 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640927481 |
Product | hypothetical protein |
Protein accession | YP_001464842 |
Protein GI | 157155660 |
COG category | [S] Function unknown |
COG ID | [COG3266] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000274525 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGAAT TCAAACCAGA AGACGAGCTG AAACCCGATC CCAGCGATCG TCGTACTGGT CGTTCTCGTC AATCTTCTGA ACGTTCTGAA CGTGGCGAAC CGCAGATCAA TTTTGATGAT ATTGAACTTG ATGACACTGA CGATCGCCGT CCGACTCGTG CGCAAAAAGA GCGCAATGAG GAACCGGAAA TCGAAGCAGA AATTGACGAA TCCGAAGATG AAACCGTGGA TGAAGAGCGC GTAGAGCGTC GTCCGCGTAA GCGCAAAAAA GCAGCCAGTA AACCCGCTTC TCGTCAGTAT ATGATGATGG GCGTCGGCAT TCTGGTTCTA CTGCTGTTGA TCATCGGTAT CGGTTCTGCG CTAAAAGCCC CCTCGACCTC TTCCAGCGAT CAAACCGCGT CTGGCGAGAA GAGTATTGAT CTTGCAGGCA ATGCGACCGA TCAGGCGAAT GGCGTGCAGC CAGCGCCGGG AACCACGTCT GCGGAAAATA CTCAGCAGGA TGTTTCTCTG CCACCGATCT CTTCTACGCC GACTCAAGGG CAAACCCCGG CGGCAACGGA TGGTCAACAA CGTGTTGAAG TGCAGGGTGA CCTGAACAAT GCGCTGACCC AGCCACAAAA TCAGCAACAG TTGAACAATG TGGCGGTCAA TTCCACATTG CCGACCGAAC CCGCGACTGT CGCGCCTGTT CGCAATGGCA ATGCATCGCG TGACACGGCG AAAACGCAAA CCGCTGAACG TCCGTCCACT ACGCGCCCAG CTCGTCAGCA GGCGGTGATT GAACCGAAAA AACCGCAAGC AACCGTGAAA ACGGAGCCGA AGCCGGTAGC ACAGACGCCG AAGCGTACTG AACCAGCTGC CCCTGTGGCG AGCACGAAGG CACCGGCTGC GACTTCTACG CCAGCACCAA AAGAGACGGC GACTACGGCT CCAGTACAGA CGGCATCCCC GGCGCAAACC ACGGCAACAC CAGCCGCTGG AGGGAAGACC GCAGGTAATG TGGGTTCGTT GAAATCGGCA CCGTCCAGCC ATTACACTCT GCAGCTGAGC AGTTCCTCTA ACTACGACAA CCTGAACGGT TGGGCGAAGA AAGAGAATCT GAAAAACTAC GTTGTCTATG AAACGACGCG TAATGGTCAG CCGTGGTATG TCCTGGTTTC TGGCGTGTAC GCTTCGAAAG AAGAGGCGAA AAAAGCGGTA TCTACATTGC CAGCAGATGT CCAGGCCAAA AACCCGTGGG CGAAACCGCT GCGTCAGGTA CAGGCCGATC TGAAGTAA
|
Protein sequence | MDEFKPEDEL KPDPSDRRTG RSRQSSERSE RGEPQINFDD IELDDTDDRR PTRAQKERNE EPEIEAEIDE SEDETVDEER VERRPRKRKK AASKPASRQY MMMGVGILVL LLLIIGIGSA LKAPSTSSSD QTASGEKSID LAGNATDQAN GVQPAPGTTS AENTQQDVSL PPISSTPTQG QTPAATDGQQ RVEVQGDLNN ALTQPQNQQQ LNNVAVNSTL PTEPATVAPV RNGNASRDTA KTQTAERPST TRPARQQAVI EPKKPQATVK TEPKPVAQTP KRTEPAAPVA STKAPAATST PAPKETATTA PVQTASPAQT TATPAAGGKT AGNVGSLKSA PSSHYTLQLS SSSNYDNLNG WAKKENLKNY VVYETTRNGQ PWYVLVSGVY ASKEEAKKAV STLPADVQAK NPWAKPLRQV QADLK
|
| |