| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3855 |
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| Symbol | rpe |
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| ID | 5589154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3829069 |
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| End bp | 3829746 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640927479 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001464840 |
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| Protein GI | 157155929 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.004029 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAGT ATTTGATTGC CCCCTCAATT CTGTCGGCTG ATTTTGCCCG CCTGGGTGAA
GATACCGCAA AAGCCCTGGC AGCTGGCGCT GATGTCGTGC ATTTTGACGT CATGGATAAC
CACTATGTTC CCAATCTGAC GATTGGGCCA ATGGTGCTGA AATCCTTGCG TAACTATGGC
ATTACCGCCC CTATCGACGT ACATCTGATG GTGAAACCCG TCGATCGCAT TGTGCCTGAT
TTCGCTGCCG CTGGTGCCAG CATCATTACC TTTCATCCAG AAGCCTCCGA GCATGTTGAC
CGCACGCTGC AACTGATTAA AGAAAATGGC TGTAAAGCGG GTCTGGTATT TAACCCGGCG
ACACCTCTGA GCTATCTGGA TTACGTGATG GATAAGCTGG ATGTGATCCT GCTGATGTCC
GTCAATCCTG GTTTCGGCGG TCAGTCTTTC ATTCCTCAAA CACTGGATAA ACTGCGCGAA
GTACGTCGCC GTATCGACGA GTCTGGCTTT GACATTCGTC TGGAAGTGGA CGGTGGCGTG
AAGGTGAACA ACATTGGCGA AATCGCTGCG GCGGGCGCGG ATATGTTCGT CGCCGGTTCG
GCAATCTTCG ACCAGCCAGA CTACAAAAAA GTCATTGATG AAATGCGCAG TGAACTGGCA
AAGGTAAGTC ATGAATAA
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| Protein sequence | MKQYLIAPSI LSADFARLGE DTAKALAAGA DVVHFDVMDN HYVPNLTIGP MVLKSLRNYG
ITAPIDVHLM VKPVDRIVPD FAAAGASIIT FHPEASEHVD RTLQLIKENG CKAGLVFNPA
TPLSYLDYVM DKLDVILLMS VNPGFGGQSF IPQTLDKLRE VRRRIDESGF DIRLEVDGGV
KVNNIGEIAA AGADMFVAGS AIFDQPDYKK VIDEMRSELA KVSHE
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