| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3854 |
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| Symbol | gph |
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| ID | 5588271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3828318 |
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| End bp | 3829076 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640927478 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001464839 |
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| Protein GI | 157158678 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00525883 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGT TTGAAGATAT TCGCGGCGTC GCTTTTGATC TTGATGGTAC GCTGGTCGAC
AGTGCTCCCG GTCTTGCTGC TGCGGTAGAT ATGGCGCTGT ATGCGCTGGA GTTGCCCATC
GCAGGTGAAG AACGCGTTAT TACCTGGATT GGTAACGGCG CAGATGTTCT GATGGAGCGC
GCATTGACCT GGGCGCGTCA GGAACGTGCG ACTCTGCGTA AAACAATGGG TAAACCGCCC
GTTGATGACG ACATTCCGGC AGAAGAACAG GTACGTATTC TGCGTAAACT GTTCGATCGC
TACTATAGCG AGGTTGCCGA AGAGGGGACG TTTTTGTTCC CGCACGTTGC CGATACGTTG
GGCGCGTTGC AGGCTAAAGG CCTGCCGCTA GGCCTGGTCA CCAACAAACC GACGCCGTTC
GTCGCGCCGC TGCTCGAAGC CTTAGATATT GCCAAATACT TTAGCGTGGT TATCGGCGGC
GATGATGTGC AAAACAAAAA ACCGCATCCG GACCCGCTGT TACTGGTGGC TGAGCGGATG
GGAATTGCCC CACAAGAGAT GCTGTTTGTC GGCGACTCAC GCAATGATAT TCAGGCGGCA
AAAGCGGCAG GTTGCCCATC AGTTGGCTTA ACCTACGGAT ATAACTACGG CGAGGCTATC
GATCTCAGCC AGCCTGATGT AATTTATCAG TCTATAAATG ACCTTCTGCC CGCATTAGGG
CTTCCGCATA GCGAAAATCA GGAATCGAAA AATGACTAA
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| Protein sequence | MNKFEDIRGV AFDLDGTLVD SAPGLAAAVD MALYALELPI AGEERVITWI GNGADVLMER
ALTWARQERA TLRKTMGKPP VDDDIPAEEQ VRILRKLFDR YYSEVAEEGT FLFPHVADTL
GALQAKGLPL GLVTNKPTPF VAPLLEALDI AKYFSVVIGG DDVQNKKPHP DPLLLVAERM
GIAPQEMLFV GDSRNDIQAA KAAGCPSVGL TYGYNYGEAI DLSQPDVIYQ SINDLLPALG
LPHSENQESK ND
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