Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3825 |
Symbol | |
ID | 5589118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3799197 |
End bp | 3800066 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640927449 |
Product | phosphoribulokinase/uridine kinase family protein |
Protein accession | YP_001464810 |
Protein GI | 157158464 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0698789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGCCA AACATCCGGT CATTGCGGTA ACAGGATCCA GCGGCGCGGG GACCACCACC ACCAGCCTCG CGTTTCGTAA AATATTCGCG CAGTTAAATC TGCATGCAGC TGAGGTGGAA GGCGACAGTT TTCACCGTTA CACCCGCCCG GAAATGGACA TGGCGATCCG CAAAGCGCGC GACGCCGGGC GGCATATCAG CTACTTCGGC CCCGAAGCGA ACGACTTCGG CCTGCTGGAA CAAACCTTCA TTGAATACGG TCAGAGCGGC AAAGGGAAAT CTCGCAAATA TCTGCATACC TACGATGAAG CCGTACCGTG GAATCAGGTA CCGGGAACAT TCACCCCCTG GCAACCTTTA CCAGAACCCA CTGATGTACT GTTTTATGAA GGTTTACACG GCGGCGTAGT CACGCCACAG CATAACGTTG CGCAGCATGT GGACTTACTG GTCGGCGTGG TGCCTATCGT TAACCTTGAG TGGATTCAAA AACTGATCCG CGACACCAGC GAGCGCGGGC ACTCACGAGA AGCAGTGATG GACTCAGTAG TGCGTTCAAT GGAAGACTAT ATCAACTACA TCACACCGCA GTTTTCCCGC ACCCATCTTA ACTTCCAGCG CGTTCCCACC GTCGACACTT CAAACCCGTT CGCGGCAAAA GGTATCCCGT CGCTGGATGA AAGCTTTGTG GTGATCCATT TTCGTAATCT GGAAGGGATC GATTTCCCCT GGCTGCTGGC GATGTTGCAA GGCTCATTCA TTTCCCACAT CAATACGTTA GTGGTACCGG GCGGCAAAAT GGGGCTGGCA ATGGAATTAA TTATGCTGCC GCTGGTGCAA CGATTGATGG AAGGAAAGAA AATCGAGTAA
|
Protein sequence | MSAKHPVIAV TGSSGAGTTT TSLAFRKIFA QLNLHAAEVE GDSFHRYTRP EMDMAIRKAR DAGRHISYFG PEANDFGLLE QTFIEYGQSG KGKSRKYLHT YDEAVPWNQV PGTFTPWQPL PEPTDVLFYE GLHGGVVTPQ HNVAQHVDLL VGVVPIVNLE WIQKLIRDTS ERGHSREAVM DSVVRSMEDY INYITPQFSR THLNFQRVPT VDTSNPFAAK GIPSLDESFV VIHFRNLEGI DFPWLLAMLQ GSFISHINTL VVPGGKMGLA MELIMLPLVQ RLMEGKKIE
|
| |