| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3791 |
|---|
| Symbol | rplE |
|---|
| ID | 5586898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3776712 |
|---|
| End bp | 3777251 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640927415 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_001464776 |
|---|
| Protein GI | 157158313 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000522149 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATTA CTACAAAGAC GAAGTAGTTA AAAAACTCAT GACTGAGTTT
AACTACAATT CTGTCATGCA AGTCCCTCGG GTCGAGAAGA TCACCCTGAA CATGGGTGTT
GGTGAAGCGA TCGCTGACAA AAAACTGCTG GATAACGCAG CAGCAGACCT GGCAGCAATC
TCCGGTCAAA AACCGCTGAT CACCAAAGCA CGCAAATCTG TTGCAGGCTT CAAAATCCGT
CAGGGCTATC CGATCGGCTG TAAAGTAACT CTGCGTGGCG AACGCATGTG GGAGTTCTTT
GAGCGCCTGA TCACTATTGC TGTACCTCGT ATCCGTGACT TCCGTGGCCT GTCCGCTAAG
TCTTTCGACG GTCGTGGTAA CTACAGCATG GGTGTCCGTG AGCAGATCAT CTTCCCAGAA
ATCGACTACG ATAAAGTCGA CCGCGTTCGT GGTTTGGATA TTACCATTAC CACTACTGCG
AAATCTGACG AAGAAGGCCG CGCTCTGCTG GCTGCCTTTG ACTTCCCGTT CCGCAAGTAA
|
|---|
| Protein sequence | MAKLHDYYKD EVVKKLMTEF NYNSVMQVPR VEKITLNMGV GEAIADKKLL DNAAADLAAI
SGQKPLITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFF ERLITIAVPR IRDFRGLSAK
SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTTA KSDEEGRALL AAFDFPFRK
|
|---|
| |