Gene EcE24377A_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3718 
SymboldegS 
ID5590786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3712285 
End bp3713352 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content53% 
IMG OID640927341 
Productserine endoprotease 
Protein accessionYP_001464708 
Protein GI157157456 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00613349 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTGA AGCTCTTACG TTCCGTTGCG ATTGGATTAA TTGTCGGCGC TATTCTGCTG 
GTTGCCATGC CTTCGCTGCG CAGCCTTAAC CCGCTTTCCA CTCCGCAATT TGACAGTACC
GATGAGACGC CTGCCAGTTA TAATCTGGCG GTTCGCCGCG CCGCGCCAGC GGTGGTTAAC
GTTTACAACC GTGGTTTGAA CACCAACTCT CACAACCAGC TTGAGATCCG CACCCTGGGA
TCCGGTGTAA TCATGGATCA ACGCGGTTAT ATCATCACCA ATAAACACGT CATCAACGAC
GCCGATCAGA TCATCGTCGC CTTACAGGAT GGTCGTGTAT TTGAAGCATT GCTGGTGGGA
TCTGACTCTC TAACCGATCT GGCGGTACTT AAAATTAATG CCACTGGCGG TTTACCTACC
ATTCCAATTA ATGCACGTCG CGTACCGCAC ATTGGCGACG TAGTACTGGC GATCGGTAAC
CCGTACAACC TCGGGCAGAC CATTACCCAG GGGATTATTA GTGCCACGGG TCGAATCGGT
CTGAACCCGA CCGGGCGGCA AAACTTCCTA CAAACCGATG CTTCCATTAA CCACGGTAAC
TCTGGCGGCG CGCTGGTGAA CTCGCTGGGA GAACTGATGG GCATTAACAC GCTGTCGTTT
GATAAGAGTA ACGATGGCGA AACGCCGGAA GGTATCGGCT TTGCGATTCC TTTCCAGTTA
GCAACCAAAA TTATGGATAA GCTGATCCGC GATGGTCGCG TGATCCGCGG CTACATTGGT
ATCGGCGGAC GCGAGATCGC ACCACTGCAC GCGCAGAGCG GTGGTATAGA TCAACTGCAA
GGGATCGTGG TTAATGAAGT GTCACCTGAC GGCCCAGCGG CGAATGCGGG TATTCAGGTC
AACGATCTGA TTATTTCGGT GGATAACAAA CCGGCCATCT CTGCTCTGGA GACGATGGAT
CAGGTGGCGG AAATTCGCCC TGGTTCGGTG ATCCCGGTTG TAGTGATGCG TGATGATAAG
CAGTTAACGC TGCAGGTCAC CATTCAGGAA TATCCGGCAA CCAATTAA
 
Protein sequence
MFVKLLRSVA IGLIVGAILL VAMPSLRSLN PLSTPQFDST DETPASYNLA VRRAAPAVVN 
VYNRGLNTNS HNQLEIRTLG SGVIMDQRGY IITNKHVIND ADQIIVALQD GRVFEALLVG
SDSLTDLAVL KINATGGLPT IPINARRVPH IGDVVLAIGN PYNLGQTITQ GIISATGRIG
LNPTGRQNFL QTDASINHGN SGGALVNSLG ELMGINTLSF DKSNDGETPE GIGFAIPFQL
ATKIMDKLIR DGRVIRGYIG IGGREIAPLH AQSGGIDQLQ GIVVNEVSPD GPAANAGIQV
NDLIISVDNK PAISALETMD QVAEIRPGSV IPVVVMRDDK QLTLQVTIQE YPATN