Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3686 |
Symbol | kdsC |
ID | 5590532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3679430 |
End bp | 3679996 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640927309 |
Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
Protein accession | YP_001464676 |
Protein GI | 157159366 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAAG CAGGTGCGTC GCTTGCGACC TGTTACGGCC CTGTCAGCGC CGACGTTATA GCAAAAGCAG AGAACATTCG TCTGCTGATC CTCGATGTCG ATGGCGTACT GTCAGATGGC CTGATTTATA TGGGCAATAA TGGCGAAGAG CTGAAAGCGT TCAATGTTCG TGACGGTTAT GGCATTCGTT GTGCGCTCAC CTCTGATATT GAAGTCGCTA TCATTACCGG GCGAAAGGCT AAACTGGTAG AAGATCGTTG TGCCACATTG GGGATCACTC ACTTGTATCA GGGGCAGTCA AACAAACTGA TCGCCTTTAG CGATCTGCTG GAAAAACTGG CGATTGCCCC GGAAAATGTG GCTTATGTCG GCGATGATCT CATCGACTGG CCGGTAATGG AAAAAGTGGG TTTAAGCGTC GCCGTGGCCG ATGCGCATCC ACTGTTGATC CCGCGCGCCG ATTACGTGAC GCGCATTGCT GGCGGTCGTG GCGCAGTGCG CGAAGTTTGC GACTTATTAC TCCTGGCGCA GGGCAAACTG GATGAAGCCA AAGGGCAATC GATATGA
|
Protein sequence | MSKAGASLAT CYGPVSADVI AKAENIRLLI LDVDGVLSDG LIYMGNNGEE LKAFNVRDGY GIRCALTSDI EVAIITGRKA KLVEDRCATL GITHLYQGQS NKLIAFSDLL EKLAIAPENV AYVGDDLIDW PVMEKVGLSV AVADAHPLLI PRADYVTRIA GGRGAVREVC DLLLLAQGKL DEAKGQSI
|
| |