Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3592 |
Symbol | tdcA |
ID | 5590149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3601004 |
End bp | 3601942 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640927218 |
Product | DNA-binding transcriptional activator TdcA |
Protein accession | YP_001464587 |
Protein GI | 157158128 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTA TTCTTCTTCC GAAAACGCAG CACCTGGTAG TCTTTCAGGA AGTCATTAGA AGTGGTTCTA TCGGCTCGGC TGCAAAAGAA TTAGGGTTAA CTCAACCGGC CGTCAGTAAA ATCATTAACG ATATTGAAGA TTATTTTGGT GTGGAATTAG TGGTGCGGAA AAATACCGGT GTAACATTAA CACCTGCCGG TCAATTGTTA CTCTCCCGTT CCGAATCCAT TACCCGTGAA ATGAAAAATA TGGTTAATGA GATAAGCGGT ATGTCTTCTG AGGCGGTGGT GGAAGTCTCA TTTGGTTTTC CTTCATTGAT TGGTTTTACT TTTATGTCAG GGATGATCAA CAAGTTCAAA GAGGTGTTCC CGAAAGCGCA GGTTTCTATG TATGAAGCGC AACTGTCTTC GTTCTTACCG GCAATCCGCG ACGGTCGACT GGATTTTGCG ATTGGTACGT TAAGTGCAGA AATGAAGCTT CAGGATTTAC ATGTTGAGCC GCTGTTCGAG TCCGAGTTTG TGCTGGTAGC CAGTAAGTCC CGAACATGCA CCGGCACCAC CACGCTGGAG TCGTTGAAGA ACGAACAGTG GGTGTTGCCA CAAACTAATA TGGGGTACTA CAGCGAACTG CTTACTACGT TACAAAGAAA TGGCATCAGT ATTGAAAACA TCGTTAAAAC CGACTCAGTC GTGACAATTT ATAATCTTGT TCTCAATGCT GATTTCTTAA CTGTAATTCC TTGTGATATG ACGTCACCTT TTGGTTCTAA TCAATTTATT ACTATTCCGG TTGAAGAAAC ATTACCTGTG GCACAATATG CCGCGGTATG GTCGAAAAAT TATCGTATTA AAAAAGCAGC ATCGGTTTTG GTGGAATTAG CCAAAGAGTA TTCATCTTAT AATGGGTGTA GACGAAGGCA ATTAATAGAA GTTGGTTAG
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Protein sequence | MSTILLPKTQ HLVVFQEVIR SGSIGSAAKE LGLTQPAVSK IINDIEDYFG VELVVRKNTG VTLTPAGQLL LSRSESITRE MKNMVNEISG MSSEAVVEVS FGFPSLIGFT FMSGMINKFK EVFPKAQVSM YEAQLSSFLP AIRDGRLDFA IGTLSAEMKL QDLHVEPLFE SEFVLVASKS RTCTGTTTLE SLKNEQWVLP QTNMGYYSEL LTTLQRNGIS IENIVKTDSV VTIYNLVLNA DFLTVIPCDM TSPFGSNQFI TIPVEETLPV AQYAAVWSKN YRIKKAASVL VELAKEYSSY NGCRRRQLIE VG
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