| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3562 |
|---|
| Symbol | |
|---|
| ID | 5587527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3576049 |
|---|
| End bp | 3577137 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640927188 |
|---|
| Product | putative pilus biogenesis initiator protein |
|---|
| Protein accession | YP_001464557 |
|---|
| Protein GI | 157157077 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATC GATTGATTGC GGCGATATTG GGCTTGTTTG GCACGCTCAC TGGCGTTCAG
GCAGCTCCTG ACGTGACCAG TGAAATTACG TATGATTTGG CATCTGGTAG AGCGGATTAT
TACTTCTGGA AGGATGAAGC GTCGGCAGGA AATAATGGAT ATATGTGGTA TGAATGTTCG
TATCCTGACC TCCAACAAAC CTGTACAGCT AATGGAAATA TATCGACAGT ACAAATCTAT
TTAACTGAAC AACGCAGTGG GATGCGTTGG CCGGTAAAAC TCAAAGGATT TAAAACAGCC
ATTGTAAGTA GCGATGAAGC GCCGCCAGGA TGCAAGGGGG GCAAAGGGCT TCAGACGAAT
CTTAAGGATT CTAATAGATC TTCATGTACA GAAGATGGTC AACATTATTA TATATACGAT
ACAAAGTTTC TTACGCTCTA CCTTGAGCAG ACAGAGATGA AGAATTTGCC GATTGGTGGC
GTCTGGAAGG GGAAAGTTAA ATTACATTCG AACAGCCCGG CCCAGGACTA TTTCGCAAAT
ATTACCCTGA ATACGCTCGA CCCCAACCAT ATTGACGTGT TCTTCCCGGA GTTCGCCCAC
GCCACGCCAA GGGTGCAGTT AGACTTGCAT CCAACAGGAA GCGTTAACGG CAGCAACTAC
GCGCAAGATC TGACCATGTT GGACATGTGC CTGTACGATG GTTTTAACGG TAATGCCATC
AGTTATGAAA TCATGCTCAA AGATGAAGGG CGACCAGCTG CAGGGCGCAG AGACGGTTAC
TTCTCTATCT ATCGTCAGGG AGGGACCACC ACCGACGAGG GAGAACGCAT TGATTACCGG
GTCAAAATGT ACAACCCGGA AACCGGTGGG CAAATTGATG TGCGCAATAA TGAAAATATG
GTCTGGAACA GCATTAACCT GAAACGTGTG CGTCCGGTGG TACTGCCCGG TATTCGCTAT
GCCGTGATGT GTGTGCCGAC ACCCTTGACT CTGGCAGTCG ATAAATTCAG CGTGATGGAT
AAACAGGCCG GGTACTACAT GGGCAAATTG TCAGTAATCT TTACGCCTTC CTTGCCAACC
ATCAATTAA
|
|---|
| Protein sequence | MRNRLIAAIL GLFGTLTGVQ AAPDVTSEIT YDLASGRADY YFWKDEASAG NNGYMWYECS
YPDLQQTCTA NGNISTVQIY LTEQRSGMRW PVKLKGFKTA IVSSDEAPPG CKGGKGLQTN
LKDSNRSSCT EDGQHYYIYD TKFLTLYLEQ TEMKNLPIGG VWKGKVKLHS NSPAQDYFAN
ITLNTLDPNH IDVFFPEFAH ATPRVQLDLH PTGSVNGSNY AQDLTMLDMC LYDGFNGNAI
SYEIMLKDEG RPAAGRRDGY FSIYRQGGTT TDEGERIDYR VKMYNPETGG QIDVRNNENM
VWNSINLKRV RPVVLPGIRY AVMCVPTPLT LAVDKFSVMD KQAGYYMGKL SVIFTPSLPT
IN
|
|---|
| |