| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3543 |
|---|
| Symbol | ebgA |
|---|
| ID | 5587097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 3552288 |
|---|
| End bp | 3555380 |
|---|
| Gene Length | 3093 bp |
|---|
| Protein Length | 1030 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640927169 |
|---|
| Product | cryptic beta-D-galactosidase subunit alpha |
|---|
| Protein accession | YP_001464538 |
|---|
| Protein GI | 157158539 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCT GGGAAAACAT TCAGCTCACC CACGAAAACC GACTTGCGCC GCGTGCGTAC
TTTTTTTCAT ATGATTCTGT TGCGCAAGCG CGTACCTTTG CCCGCGAAAT CAGCAGCCTG
TTTCTGCCCT TAAGCGGTCA GTGGAATTTC CACTTTTTTG ACCATCCGCT GCAAGTACCA
GAAGCCTTCA CCTCTGAGTT AATGGCTGAC TGGGGGCATA TTACCGTCCC CGCCATGTGG
CAAATGGAAG GTCACGGCAA ACTGCAATAT ACCGACGAAG GTTTTCCGTT CCCCATCGAT
GTGCCGTTTG TCCCCAGCGA TAACCCAACC GGTGCCTATC AACGTATTTT CACCCTCAGC
GACGGCTGGC AGGGTAAACA GACGCTGATT AAATTTGACG GCGTCGAAAC CTATTTTGAA
GTCTATGTTA ACGGTCAGTA TGTGGGTTTC AGCAAGGGCA GTCGCCTGAC CGCAGAGTTT
GACATCAGCG CGATGGTTAA AACCGGCGAC AACCTGTTGT GTGTGCGCGT GATGCAGTGG
GCGGACTCTA CCTACGTGGA AGACCAGGAT ATGTGGTGGT CAGCGGGGAT CTTCCGCGAT
GTTTATCTGG TCGGAAAACA CCTAACGCAT ATTAACGATT TCACTGTGCG TACCGACTTT
GACGAAGCCT ATTGCGATGC CACGCTTTCC TGCGAAGTGG TGCTGGAAAA TCTCGCCGCC
TCCCCTGTCG TCACGACGCT GGAATATACC CTGTTTGATG GCGAACGCGT GGTGCACAGC
AGCGCCATTG ATCATTTGGC AATTGAAAAA CTGACCAGCG CCAGCTTTGC TTTTACTGTC
GAACAGCCGC AGCAATGGTC AGCAGAATCC CCTTATCTTT ACCATCTGGT CATGACGCTG
AAAGACGCCA ACGGCAACGT TCTGGAAGTG GTGCCACAAC GCGTTGGCTT CCGTGATATC
AAAGTGCGCG ACGGTCTGTT CTGGATCAAT AACCGTTATG TGATGCTGCA CGGCGTCAAC
CGTCACGACA ACGATCATCG CAAAGGCCGC GCCGTTGGAA TGGATCGCGT CGAGAAAGAT
CTCCAGTTGA TGAAGCAGCA CAATATCAAC TCCGTGCGTA CCGCTCACTA CCCGAACGAT
CCGCGTTTTT ACGAACTGTG TGATATCTAC GGCTTGTTTG TGATGGCGGA AACCGACGTC
GAATCGCACG GCTTTGCTAA TGTCGGCGAT ATCAGCCGTA TTACCGACGA TCCGCAGTGG
GAAAAAGTCT ACGTCGAGCG CATTGTTCGC CATATTCACG CGCAGAAAAA CCATCCGTCG
ATCATCATCT GGTCGCTGGG CAATGAATCC GGCTATGGCT GTAACATCCG CGCGATGTAC
CACGCAGCGA AGGCGCTGGA TGACACGCGA CTGGTGCATT ACGAAGAAGA TCGCGATGCT
GAAGTGGTCG ATATTATTTC CACCATGTAC ACCCGCGTGC CGCTGATGAA TGAGTTTGGT
GAATACCCGC ATCCGAAGCC GCGCATCATC TGTGAATATG CTCATGCGAT GGGGAACGGA
CCAGGCGGGC TGACGGAGTA CCAGAACGTC TTCTATAAGC ACGATTGTAT TCAGGGACAT
TATGTTTGGG AGTGGTGCGA CCACGGGATC CAGGCGCAGG ATGACAACGG CAACGTCTGG
TATAAATTCG GCGGCGACTA CGGCGACTAT CCCAACAACT ATAACTTCTG TCTTGATGGT
TTGATCTATT CCGATCAGAC GCCGGGACCG GGCCTGAAAG AGTACAAACA GGTTATCGCG
CCGGTAAAAA TCCACGCGCT GGATCTGACT CACGGCGAGC TGAAAGTCGA AAATAAACTG
TGGTTTACCA CGCTTGATGA CTACACCCTG CACGCAGAGG TGCGCGTCGA AGGTGAAACG
CTCGCGACGC AGCAGATTAA ACTGCGCGAC GTTGCGCCGA ACAGCGAAGC CCCCTTGCAG
ATCACGCTGC CGCAGCTGGA CGCCCGCGAA GCGTTCCTCA ACATTACGGT GACCAAAGAT
TCCCGCACCC GCTACAGCGA AGCCGGGCAT TCTATCGCCA CTTATCAGTT CCCGCTGAAG
GAAAACACCG CGCAGCCAGT GCCTTTCGCA CCAAATAATG CGCGTCCGCT GACGCTGGAA
GACGATCGTT TGAGCTGCAC CGTTCGCGGC TACAACTTCG CGATCACCTT CTCAAAAATG
AGTGGCAAAC CGACATCCTG GCAGGTGAAT GGCGAATCGC TGCTGACTCG CGAGCCAAAG
ATCAACTTCT TCAAGCCGAT GATCGACAAC CACAAGCAGG AGTACGAAGG GCTGTGGCAA
CCGAATCATT TGCAGATCAT GCAGGAACAT CTGCGCGACT TTGCCGTAGA ACAGAGCGAT
GGTGAAGTGC TGATCATCAG CCGCACAGTT ATTGCCCCGC CGGTGTTTGA CTTCGGGATG
CGCTGCACCT ACATCTGGCG CATCGCTGCC GATGGCCAGG TTAACGTGGC GCTTTCCGGC
GAGCGTTACG GCGACTATCC GCACATCATT CCGTGCATCG GTTTCACCAT GGGAATTAAC
GGCGAATACG ATCAGGTGGC GTATTACGGT CGTGGACCGG GCGAAAACTA CGCCGACAGC
CAGCAGGCTA ACATCATCGA TATCTGGCGC AGCACCGTCG ATGCCATGTT CGAGAACTAT
CCCTTCCCGC AGAACAACGG CAACCGTCAG CATGTCCGCT GGACGGCACT GACTAACCGC
CACGGCAACG GTTTGCTGGT GGTTCCGCAG CGCCCAATTA ACTTCAGCGC CTGGCACTAT
ACCCAGGAAA ACATCCACGC TGCCCAGCAC TGTAACGAGC TGCAGCGCAG TGATGACATC
ACCCTGAACC TCGACCACCA GCTACTTGGC CTCGGCTCCA ACTCCTGGGG CAGCGAGGTG
CTGGACTCCT GGCGCGTCTG GTTCCGTGAC TTCAGCTACG GCTTTACGTT GCTGCCGGTT
TCTGGCGGAG AAGCTACCGC GCAAAGCCTG GCGTCGTATG AGTTCGGCGC AGGGTTCTTT
TCCACGAATT TGCACAGCGA GAATAAGCAA TGA
|
|---|
| Protein sequence | MNRWENIQLT HENRLAPRAY FFSYDSVAQA RTFAREISSL FLPLSGQWNF HFFDHPLQVP
EAFTSELMAD WGHITVPAMW QMEGHGKLQY TDEGFPFPID VPFVPSDNPT GAYQRIFTLS
DGWQGKQTLI KFDGVETYFE VYVNGQYVGF SKGSRLTAEF DISAMVKTGD NLLCVRVMQW
ADSTYVEDQD MWWSAGIFRD VYLVGKHLTH INDFTVRTDF DEAYCDATLS CEVVLENLAA
SPVVTTLEYT LFDGERVVHS SAIDHLAIEK LTSASFAFTV EQPQQWSAES PYLYHLVMTL
KDANGNVLEV VPQRVGFRDI KVRDGLFWIN NRYVMLHGVN RHDNDHRKGR AVGMDRVEKD
LQLMKQHNIN SVRTAHYPND PRFYELCDIY GLFVMAETDV ESHGFANVGD ISRITDDPQW
EKVYVERIVR HIHAQKNHPS IIIWSLGNES GYGCNIRAMY HAAKALDDTR LVHYEEDRDA
EVVDIISTMY TRVPLMNEFG EYPHPKPRII CEYAHAMGNG PGGLTEYQNV FYKHDCIQGH
YVWEWCDHGI QAQDDNGNVW YKFGGDYGDY PNNYNFCLDG LIYSDQTPGP GLKEYKQVIA
PVKIHALDLT HGELKVENKL WFTTLDDYTL HAEVRVEGET LATQQIKLRD VAPNSEAPLQ
ITLPQLDARE AFLNITVTKD SRTRYSEAGH SIATYQFPLK ENTAQPVPFA PNNARPLTLE
DDRLSCTVRG YNFAITFSKM SGKPTSWQVN GESLLTREPK INFFKPMIDN HKQEYEGLWQ
PNHLQIMQEH LRDFAVEQSD GEVLIISRTV IAPPVFDFGM RCTYIWRIAA DGQVNVALSG
ERYGDYPHII PCIGFTMGIN GEYDQVAYYG RGPGENYADS QQANIIDIWR STVDAMFENY
PFPQNNGNRQ HVRWTALTNR HGNGLLVVPQ RPINFSAWHY TQENIHAAQH CNELQRSDDI
TLNLDHQLLG LGSNSWGSEV LDSWRVWFRD FSYGFTLLPV SGGEATAQSL ASYEFGAGFF
STNLHSENKQ
|
|---|
| |