Gene EcE24377A_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3508 
Symbol 
ID5586151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3516435 
End bp3516986 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID640927135 
Productputative fimbrial protein 
Protein accessionYP_001464505 
Protein GI157156774 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000529621 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTT TTAAAAAGTC ACTTCTTGTT GCTGGCGTAG CAATGATTCT TTCCAATAAC 
GTATTTGCTG ACGAAGGTCA CGGCATTGTT AAATTTAAAG GTGAAGTTAT CTCTGCTCCA
TGTTCAATTA AACCAGGTGA CGAAGACTTA ACTGTAAATC TGGGTGAAGT AGCAGATACC
GTTCTGAAAA GCGACCAGAA ATCTTTGGCT GAGCCTTTCA CTATTCACCT GCAAGACTGC
ATGTTGAGCC AGGGTGGAAC CACTTATTCA AAAGCGAAGG TTACTTTCAC CACAGCGAAT
ACTATGACGG GTCAGACTGA CCTGCTGAAA AACACCAAAG AAACTGAAAT CGGTGGTGCC
ACAGGCGTTG GCGTACGTAT TCTGGATAGC CAGAGCGGCG AAGTGACTTT AGGTACTCCG
GTAGTAATTA CATTCAACAA TACTAACAGC TATCAGGAAC TGAACTTCAA AGCTCGTATG
GAATCCCCAA GCAAAGATGC TACCCCGGGC AACGTTTACG CTCAGGCTGA CTATAAGATT
GCTTACGAGT AA
 
Protein sequence
MSAFKKSLLV AGVAMILSNN VFADEGHGIV KFKGEVISAP CSIKPGDEDL TVNLGEVADT 
VLKSDQKSLA EPFTIHLQDC MLSQGGTTYS KAKVTFTTAN TMTGQTDLLK NTKETEIGGA
TGVGVRILDS QSGEVTLGTP VVITFNNTNS YQELNFKARM ESPSKDATPG NVYAQADYKI
AYE