Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3508 |
Symbol | |
ID | 5586151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3516435 |
End bp | 3516986 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640927135 |
Product | putative fimbrial protein |
Protein accession | YP_001464505 |
Protein GI | 157156774 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000529621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTT TTAAAAAGTC ACTTCTTGTT GCTGGCGTAG CAATGATTCT TTCCAATAAC GTATTTGCTG ACGAAGGTCA CGGCATTGTT AAATTTAAAG GTGAAGTTAT CTCTGCTCCA TGTTCAATTA AACCAGGTGA CGAAGACTTA ACTGTAAATC TGGGTGAAGT AGCAGATACC GTTCTGAAAA GCGACCAGAA ATCTTTGGCT GAGCCTTTCA CTATTCACCT GCAAGACTGC ATGTTGAGCC AGGGTGGAAC CACTTATTCA AAAGCGAAGG TTACTTTCAC CACAGCGAAT ACTATGACGG GTCAGACTGA CCTGCTGAAA AACACCAAAG AAACTGAAAT CGGTGGTGCC ACAGGCGTTG GCGTACGTAT TCTGGATAGC CAGAGCGGCG AAGTGACTTT AGGTACTCCG GTAGTAATTA CATTCAACAA TACTAACAGC TATCAGGAAC TGAACTTCAA AGCTCGTATG GAATCCCCAA GCAAAGATGC TACCCCGGGC AACGTTTACG CTCAGGCTGA CTATAAGATT GCTTACGAGT AA
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Protein sequence | MSAFKKSLLV AGVAMILSNN VFADEGHGIV KFKGEVISAP CSIKPGDEDL TVNLGEVADT VLKSDQKSLA EPFTIHLQDC MLSQGGTTYS KAKVTFTTAN TMTGQTDLLK NTKETEIGGA TGVGVRILDS QSGEVTLGTP VVITFNNTNS YQELNFKARM ESPSKDATPG NVYAQADYKI AYE
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