| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3466 |
|---|
| Symbol | hyb0 |
|---|
| ID | 5588909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3478405 |
|---|
| End bp | 3479523 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640927094 |
|---|
| Product | hydrogenase 2 small subunit |
|---|
| Protein accession | YP_001464464 |
|---|
| Protein GI | 157157587 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGAG ATAACACCCT CATCCATTCT CACGGCATTA ACCGTCGTGA TTTCATGAAG
CTTTGTGCAG CATTAGCCGC CACCATGGGG TTAAGTAGCA AAGCCGCTGC AGAGATGGCC
GAATCGGTTA CTAACCCGCA GCGTCCGCCA GTTATCTGGA TTGGCGCGCA GGAGTGCACC
GGTTGTACGG AATCTCTGCT TCGTGCAACG CATCCAACGG TAGAAAACCT CGTGCTGGAG
ACTATCTCTC TGGAGTATCA CGAAGTGCTT TCCGCCGCCT TCGGTCATCA GGTCGAAGAG
AACAAACATA ACGCACTTGA GAAGTACAAA GGGCAGTATG TGTTGGTTGT GGATGGTTCC
ATCCCATTAA AAGATAACGG TATTTATTGC ATGGTTGCTG GTGAGCCGAT TGTGGATCAC
ATCCGCAAAG CGGCAGAAGG CGCAGCAGCG ATTATCGCTA TCGGTTCCTG CTCTGCGTGG
GGCGGTGTTG CCGCAGCTGG AGTTAACCCA ACTGGCGCAG TCAGCCTGCA AGAAGTTCTG
CCAGGCAAAA CCGTTATCAA TATTCCGGGC TGCCCGCCGA ACCCGCACAA CTTCCTCGCG
ACCGTTGCGC ACATCATCAC TTACGGCAAA CCGCCGAAAC TGGATGACAA AAATCGTCCG
ACCTTCGCCT ATGGCCGTCT GATTCACGAA CACTGCGAAC GTCGCCCGCA CTTCGATGCT
GGTCGTTTTG CCAAAGAGTT CGGTGATGAA GGCCACCGTG AAGGCTGGTG CCTGTACCAC
CTCGGCTGTA AAGGGCCAGA AACTTACGGC AACTGCTCAA CGCTGCAATT CTGCGATGTT
GGCGGCGTGT GGCCGGTAGC GATTGGTCAC CCATGCTATG GCTGTAACGA AGAAGGTATC
GGCTTCCATA AAGGCATCCA TCAGCTTGCC AACGTCGAAA ATCAGACTCC GCGTTCACAG
AAACCGGATG TTAACGCTAA AGAGGGCGGC AACGTCTCTG CAGGCGCTAT TGGTTTGCTC
GGCGGTGTGG TTGGGCTGGT TGCCGGTGTC AGCGTGATGG CGGTGCGTGA ACTGGGTCGT
CAGCAAAAGA AAGATAACGC TGACTCACGG GGAGAATAA
|
|---|
| Protein sequence | MTGDNTLIHS HGINRRDFMK LCAALAATMG LSSKAAAEMA ESVTNPQRPP VIWIGAQECT
GCTESLLRAT HPTVENLVLE TISLEYHEVL SAAFGHQVEE NKHNALEKYK GQYVLVVDGS
IPLKDNGIYC MVAGEPIVDH IRKAAEGAAA IIAIGSCSAW GGVAAAGVNP TGAVSLQEVL
PGKTVINIPG CPPNPHNFLA TVAHIITYGK PPKLDDKNRP TFAYGRLIHE HCERRPHFDA
GRFAKEFGDE GHREGWCLYH LGCKGPETYG NCSTLQFCDV GGVWPVAIGH PCYGCNEEGI
GFHKGIHQLA NVENQTPRSQ KPDVNAKEGG NVSAGAIGLL GGVVGLVAGV SVMAVRELGR
QQKKDNADSR GE
|
|---|
| |