| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3423 |
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| Symbol | gspH |
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| ID | 5587607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3431082 |
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| End bp | 3431645 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640927050 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001464420 |
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| Protein GI | 157158634 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTGAAC GCGGATTCAC ACTTCTGGAA ATCATGTTGG TGATTTTCCT TATCGGCCTT
GCCAGTTCGG GCGTGGTACA GACGTTTGCG ACCGATTCTG AACCGCCCGC GAAAAAAGCG
GCACAGGATT TTCTGACTCG CTTTGCGCAG TTTAAGGACA GGGCAGTGAT TGAAGGGCAG
ACACTCGGTG TGCTAATCGA CGCGCCTGGC TATCAGTTTA TGCAGCGCCG TCAGGGGCAG
TGGTTGCCCG TTTCCGCGAC CCGGTTATCG GCACAGGTTA CGGTGCCAAA ACAGGTGCAG
ATGCTGTTAC AACCCGGAAG TGATATCTGG CAGAAGGAGT ATGCGCTGGA GCTGCAACGT
CGTCGCCTGA CGCTGCACGA TATTGAACTG GAGCTGCAAA AAGAGGCGAA AAAGAAGACG
CCGCAGATCC GTTTTTCGCC TTTTGAACCC GCCACGCCGT TTACGCTGCG CTTCTACTCG
GCGGCGCAAA ACGCATGTTG GGCGGTAAAA CTGGCGCACG ATGGCGCGTT ATCCCTCAAT
CAATGTGATG AGAGGATGCC ATGA
|
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| Protein sequence | MPERGFTLLE IMLVIFLIGL ASSGVVQTFA TDSEPPAKKA AQDFLTRFAQ FKDRAVIEGQ
TLGVLIDAPG YQFMQRRQGQ WLPVSATRLS AQVTVPKQVQ MLLQPGSDIW QKEYALELQR
RRLTLHDIEL ELQKEAKKKT PQIRFSPFEP ATPFTLRFYS AAQNACWAVK LAHDGALSLN
QCDERMP
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