Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3338 |
Symbol | |
ID | 5586974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3356792 |
End bp | 3357814 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640926971 |
Product | IS100, transposase |
Protein accession | YP_001464342 |
Protein GI | 157157419 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCACTT TTGAGACAGT TATGGAAATT AAAATCCTGC ACAAGCAGGG AATGAGTAGC CGGGCGATTG CCAGAGAACT GGGGATCTCC CGCAATACGG TTAAACGTTA TTTGCAGGCA AAATCTGAGC CGCCAAAATA TACGCCGCGA CCTGCTGTTG CTTCACTCCT GGATGAATAC CGGGATTATA TTCGTCAACG CATCGCCGAT GCTCATCCTT ACAAAATCCC GGCAACGGTA ATCGCTCGCG AGATCAGAGA CCAGGGATAT CGTGGCGGAA TGACCATTCT CAGGGGATTC ATTCGTTCTC TCTCGGTTCC TCAGGAGCAG GAGCCTGCCG TTCGGTTCGA AACTGAACCC GGACGACAGA TGCAGGTTGA CTGGGGCACT ATGCGTAATG GCCGCTCACC GCTTCACGTG TTCGTTGCTG TTCTCGGATA CAGCCGAATG TTGTACATCG AATTCACTGA CAATATGCGT TATGACACGC TGGAAACCTG CCATCGTAAT GCGTTCCGCT TCTTTGGTGG TGTGCCGCGC GAAGTGTTGT ATGACAATAT GAAAACTGTG GTTCTGCAAC GTGACGCATA TCAGACCGGT CAGCACCGGT TCCATCCTTC GCTGTGGCAG TTCGGCAAGG AGATGGGCTT CTCTCCCCGA CTGTGTCGCC CCTTCAGGGC ACAGACTAAA GGTAAGGTGG AACGGATGGT GCAGTACACC CGTAACAGTT TTTACATCCC ACTAATGACT CGCCTGCGCC CGATGGGGAT CACTGTCGAT GTTGAAACAG CCAACCGCCA CGGTCTGCGC TGGCTGCACG ATGTCGCTAA CCAACGAAAG CATGAAACAA TCCAGGCCCG TCCCTGCGAT CGCTGGCTCG AAGAGCAGCA GTCCATGCTG GCACTGCCTC CGGAGAAAAA AGAGTATGAC GTGCATCCTG GTGAAAATCT GGTGAACTTC GACAAACACC CCCTGCATCA TCCACTCTCC ATCTACGACT CATTCTGCAG AGGAGTGGCG TGA
|
Protein sequence | MVTFETVMEI KILHKQGMSS RAIARELGIS RNTVKRYLQA KSEPPKYTPR PAVASLLDEY RDYIRQRIAD AHPYKIPATV IAREIRDQGY RGGMTILRGF IRSLSVPQEQ EPAVRFETEP GRQMQVDWGT MRNGRSPLHV FVAVLGYSRM LYIEFTDNMR YDTLETCHRN AFRFFGGVPR EVLYDNMKTV VLQRDAYQTG QHRFHPSLWQ FGKEMGFSPR LCRPFRAQTK GKVERMVQYT RNSFYIPLMT RLRPMGITVD VETANRHGLR WLHDVANQRK HETIQARPCD RWLEEQQSML ALPPEKKEYD VHPGENLVNF DKHPLHHPLS IYDSFCRGVA
|
| |