Gene EcE24377A_3298 details

Gene Information

• Locus tag: EcE24377A_3298
• Symbol: rdgB
• ID: 5590044
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 3311825
• End bp: 3312418
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640926935
• Product: putative deoxyribonucleotide triphosphate pyrophosphatase
• Protein accession: YP_001464307
• Protein GI: 157155704
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAG TTGTCCTCGC AACCGGCAAT GCCGGTAAAG TGCGTGAGCT GGCGTCGCTG 
CTTAGCGACT TCGGTCTTGA TATCGTGGCC CAAACAGACC TCGGCGTAGA TTCCGCTGAA 
GAAACCGGCC TGACCTTTAT CGAAAACGCG ATTCTGAAAG CGCGCCATGC GGCAAAAGTG 
ACCGGTTTAC CGGCAATTGC CGACGACTCT GGTCTGGCGG TAGATGTGCT TGGCGGCGCG 
CCGGGCATTT ACTCCGCGCG TTATTCCGGT GAAGACGCGA CCGATCTAAA GAATCTGCAA 
AAACTGCTGG AAACACTGAA AGACGTACCG GATGACCAAC GTCAGGCGCG TTTCCACTGC 
GTGCTGGTAT ATCTGCGTCA CGCGGAAGAT CCGACTCCGC TGGTATGCCA CGGTAGCTGG 
CCGGGCGTGA TTACTCGTGA ACCAGCGGGC ACTGGTGGCT TTGGTTATGA TCCAATCTTC 
TTCGTACCTT CCGAAGGGAA AACCGCCGCC GAACTGACCC GCGAAGAAAA GAGCGCCATT 
TCCCACCGTG GTCAGGCATT GAAACTGCTG CTGGACGCTT TACGTAATGG TTAA 

 

Protein sequence

MQKVVLATGN AGKVRELASL LSDFGLDIVA QTDLGVDSAE ETGLTFIENA ILKARHAAKV 
TGLPAIADDS GLAVDVLGGA PGIYSARYSG EDATDLKNLQ KLLETLKDVP DDQRQARFHC 
VLVYLRHAED PTPLVCHGSW PGVITREPAG TGGFGYDPIF FVPSEGKTAA ELTREEKSAI 
SHRGQALKLL LDALRNG