Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3294 |
Symbol | |
ID | 5588527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3309244 |
End bp | 3310224 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640926931 |
Product | twitching motility family protein |
Protein accession | YP_001464303 |
Protein GI | 157155068 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATGG AAGAAATTGT GGCCCTTAGT GTAAAGCATA ACGTCTCGGA TCTACACCTG TGCAGCGCCT GGCCCGCACG ATGGCGCATT CGCGGCAGAA TGGAAGCTGC GCCGTTTGAT GCGCCGGACG TCGAAGAGCT ACTGCGGGAG TGGCTGGATG ACGATCAGCG GGCAATATTG CTGGAAAATG GCCAGCTGGA TTTTGCCGTG TCGCTGGCGG AAAACCAGCG GTTGCGTGGC AGTGCGTTCG CGCAACGGCA AGGTATTTCT CTGGCATTAC GGTTGTTACC TTCGCACTGT CCACAGCTCG AACAGCTTGG TGCGCCACCG GTATTGCCGG AATTACTCAA GAGCGAGAAT GGCCTGATTC TGGTGACGGG GGCGACGGGG AGCGGCAAAT CTACCACGCT GGCGGCGATG GTTGGCTATC TTAATCAACA TGCCGATGCG CATATTCTGA CGCTGGAAGA TCCTGTGGAA TATCTCTATG CCAGCCAGCG ATGTTTGATC CAGCAGCGGG AAATTGGTTT GCACTGTATG ACTTTCGCAT CGGGGTTGCG GGCTGCATTG CGGGAAGATC CTGATGTGAT TTTGCTCGGA GAGCTGCGTG ACAGCGAGAC AATCCGTCTG GCACTGACGG CGGCAGAAAC CGGGCATTTG GTGCTGGCAA CATTACATAC GCGTGGTGCC GCGCAGGCAG TTGAGCGACT GGTGGATTCA TTTCCAGCGC AGGAAAAAGA TCCCGTGCGT AATCAACTGG CAGGTAGTTT ACGGGCGGTG TTGTCACAAA AGCTGGAAGT GGATAAACAG GAAGGACGCG TGGCGCTGTT TGAATTACTG ATTAACACAC CCGCGGTGGG GAATTTGATT CGCGAAGGGA AAACCCACCA GTTACCGCAT GTTATTCAAA CCGGGCAGCA GGTGGGGATG TTAACGTTTC AGCAGAGTTA TCAGCAGCGA GTGGGGGAAG GGCGTTTGTG A
|
Protein sequence | MNMEEIVALS VKHNVSDLHL CSAWPARWRI RGRMEAAPFD APDVEELLRE WLDDDQRAIL LENGQLDFAV SLAENQRLRG SAFAQRQGIS LALRLLPSHC PQLEQLGAPP VLPELLKSEN GLILVTGATG SGKSTTLAAM VGYLNQHADA HILTLEDPVE YLYASQRCLI QQREIGLHCM TFASGLRAAL REDPDVILLG ELRDSETIRL ALTAAETGHL VLATLHTRGA AQAVERLVDS FPAQEKDPVR NQLAGSLRAV LSQKLEVDKQ EGRVALFELL INTPAVGNLI REGKTHQLPH VIQTGQQVGM LTFQQSYQQR VGEGRL
|
| |