| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3278 |
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| Symbol | |
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| ID | 5589483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3294068 |
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| End bp | 3296866 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640926915 |
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| Product | sigma-54 dependent transcription regulator |
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| Protein accession | YP_001464287 |
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| Protein GI | 157158736 |
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| COG category | [K] Transcription |
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| COG ID | [COG3933] Transcriptional antiterminator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGGA TTGATGTTAT TCACAAGGAG CTGGAGCGGC TGACGTATGG GCTGGAACTG
TCTGATTTAG CGAAGGAGAA AGCATTTACT GCTGAGGCGA TTGGTTTTAA CCTTGGGCTG
GCACGCAACT CGGTTAGTAA AGATCTTAAT CAATTATGGA ATGAAGGCCT GGTGGTAAAA
AGTCAGGGAC GTCCTGTTTT TTTTCTACAT CGTCACGCAC TAGAATTGCT CATTAATCGA
AAACTGGATG ATTGCGAATG CATAGTTCAT TCAGTGGCTA GTTTATTGCC AAAGAAAGAA
AAATATACAG ATGATGATCC GTTTTCCGGA CTTATCGGAT ACGACCGTAG TCTCCGTGAT
GCGGTAGAAA AAGGCCGCGC AGCGGTGCTT TATCCCCACG GACTACATGT GCTGTTAACC
GGTGCATCTG GTGTTGGCAA AACATTCTTT GCTGAGTTAA TGCATTGCTT CGCTTGCAAG
CACACCATAG GTTCGCCACC TCCGTTGGTT TACTTTAACT GTGCCGAATA TGCTCATAAT
CCGGAGTTGC TTTCCTCACA TCTGTTTGGT CACCATAAGG GGGCATTTAC CGGGGCAAGT
GAGAATAAAA CGGGATTGGT GGAGCAAGCT GACGGAGGTT ATTTACTTCT GGATGAAGTG
CATCGCCTCC CGTACGAAGG ACAAGAGAAG CTCTTTTCTA TTCTCGATAA AGGTGAATAC
CGCCCACTTG GTTCAAGTGG GCCAACATAT TCAATTTCGG TGCGCCTTAT TTGCGCCACT
ACAGAGTCGG TCAACTCGGC ACTATTGCGT ACCTTCCAGC GGCGTATCCA GGTATGTATT
GACTTACCGG GTATTCGCCA GCGTTCGGTC GAGGAGCAGC TCGAATTGAT TGTAAGCTTC
TTTCAGCGTG AAAGTCGTAA AATTGAACGT ACCATAAGCC TTGATAAAAC GCTCTTGCAT
TGGTTGTTAA GTAAACCCCT GGAAGGCAAT ATCGGCCAGC TTAAAAGTGA TATTCAGTTC
TTGTGCGCGC AGGCGTGGGC GTCGGGAATG ACCGAGCGTA ATGATACGCT AGAGTTAGAT
AAACGACTGG CGGAGATGTC GTTTAATACC ACGCCAGAGC AGCGTCTGCT GGTCGATGCG
TTGTTTGGCG GTAAAGATCG TCTGAACGTG GATGCGCGTA CGTTGCCCGC GTTAAAAAAT
TCGTTGGCGA CCAGCGCGGA AATAGAAGAG AGCGACCTGT TTTACAGTTT CCTGACTCGT
GAATATGTCA ATCTGCGCAA CAGTAACGTG CCGCCCGCAG AAACGCTGGC TATCCTGAAA
AACAAACTCA GTTCGATTTT TGAATATGGT CTTTATAGCC GCCATAGTGC GGCGCATCCA
CCGCGCTATG GCGATCAAAT TGAGGAGCGT GTGACGCTGC TGATCGGTTA CGTGGAGCAG
GTATTAGGAT TTACATTGCC AGAAAACCTG GCGAACCCGT TACGTAAACA CTTTCTTGCG
CTGATTGGCT ATGTGCGGCG AGGGCTTATA TCTCAACTCT ATTCATCCAG CCTGATTCTG
GATCGCTGTA AAGATGAGTA TGACAATGCC ACGCTTCTGT GCCGCAAAAT CAATGAGTTG
TTGCATATTC AGTGCCCGGC GACGGAGGTG GTCTGGCTGT GCCTGTTCCT GAAAGAGTGT
CGCCACTACC GCCAGCGCAT CGACACCAGC CCGGATTGCG GCGTGATTCT AATCGCTCAC
GGTGCGACCA CCGCAACGAG CCAGGCGCAA TATGTGAACC GGGTGCTGGA GCGCGATCTG
TTCTACGCAA TTGATATGCC ATTTGAGCAG TCGGTGCATG ACACCCTGGA AACCCTGACC
CGGATGATTC AGGACCGGTG CTGGCAGCGG CTGATACTGA TGGTGGATAT CGGATCGCTG
GTCCATTTTG GCAGCACCAT CAGCAAGCTG TTCCAGATTG ACGTTCTGTT GTTGCCAAAT
ATCACTCTGA CCAGCCTGCT GGAGGTTGGG CTGGATTTAA GCTACGAAAC TGGCGATCTA
TCGCAATTGG CTGTGCTTAT GCAGAGTAAA AATATCCCTT GTCGGCTCTG CACGCCGCAG
CAAGAGAGCG GTGGCAAAGT GCTGGTTATC TCATGTATAA CCGGAATGGG GACGGCGGAA
AAGATCAAAA AGGTGCTGGA GGAGAGCTTT GGCGAGCTGA TGTCGCAGGA CACGCGTATG
GTGATTCTCG ACTATAACGA GGTGCGCAGC CTGGAGCGTA TTCAGCAGGC GCTTAATGCC
AGTGAACGGC TGGCAGGGAT CGTCGGCACC TTCCAGCCGG GACTGCCGGA TATACCGTTT
ATCTCGCTGG AGGAACTGTT TTCCGAGCAA GGGCCGGAGC TGGTGCTCAG CCTGCTGACG
CCGGATCTCT CAAGCAGCGA GCGCCGACTG GAGATGGAGC GCAGCGCCAT GCGCTTTATC
AGCGCGCTGA CCATGGAGAG CATCATCAAC CATATTTCGG TGCTCAACCC GCAGCGAATT
CTGAAAGAGA TCGAGGATGT TCTGAACTAC TTAACCAACA CGCTCTCCCT GAAACCGAGC
CGCCAGGTGA CACTACGTTT TCTGATCCAC TGCTGCTGCA TGGTCGAGCG TATCGTGATT
AACCGCAAAC CGTTACAGAT GGCGCTAGAA AACCGGCTTG ATCTGGACGC TCGTGCCTTT
AGCGTCATCA AATCCTCCTT TTTGCCGATT GAAGAGGCTT ACGCTATCCG TTTATCGGAC
GCAGAATATT TTTATATCTA CGAACTGCTC TACAGCTGA
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| Protein sequence | MRRIDVIHKE LERLTYGLEL SDLAKEKAFT AEAIGFNLGL ARNSVSKDLN QLWNEGLVVK
SQGRPVFFLH RHALELLINR KLDDCECIVH SVASLLPKKE KYTDDDPFSG LIGYDRSLRD
AVEKGRAAVL YPHGLHVLLT GASGVGKTFF AELMHCFACK HTIGSPPPLV YFNCAEYAHN
PELLSSHLFG HHKGAFTGAS ENKTGLVEQA DGGYLLLDEV HRLPYEGQEK LFSILDKGEY
RPLGSSGPTY SISVRLICAT TESVNSALLR TFQRRIQVCI DLPGIRQRSV EEQLELIVSF
FQRESRKIER TISLDKTLLH WLLSKPLEGN IGQLKSDIQF LCAQAWASGM TERNDTLELD
KRLAEMSFNT TPEQRLLVDA LFGGKDRLNV DARTLPALKN SLATSAEIEE SDLFYSFLTR
EYVNLRNSNV PPAETLAILK NKLSSIFEYG LYSRHSAAHP PRYGDQIEER VTLLIGYVEQ
VLGFTLPENL ANPLRKHFLA LIGYVRRGLI SQLYSSSLIL DRCKDEYDNA TLLCRKINEL
LHIQCPATEV VWLCLFLKEC RHYRQRIDTS PDCGVILIAH GATTATSQAQ YVNRVLERDL
FYAIDMPFEQ SVHDTLETLT RMIQDRCWQR LILMVDIGSL VHFGSTISKL FQIDVLLLPN
ITLTSLLEVG LDLSYETGDL SQLAVLMQSK NIPCRLCTPQ QESGGKVLVI SCITGMGTAE
KIKKVLEESF GELMSQDTRM VILDYNEVRS LERIQQALNA SERLAGIVGT FQPGLPDIPF
ISLEELFSEQ GPELVLSLLT PDLSSSERRL EMERSAMRFI SALTMESIIN HISVLNPQRI
LKEIEDVLNY LTNTLSLKPS RQVTLRFLIH CCCMVERIVI NRKPLQMALE NRLDLDARAF
SVIKSSFLPI EEAYAIRLSD AEYFYIYELL YS
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