| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3270 |
|---|
| Symbol | |
|---|
| ID | 5588248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 3288736 |
|---|
| End bp | 3289494 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640926907 |
|---|
| Product | M48B family peptidase |
|---|
| Protein accession | YP_001464279 |
|---|
| Protein GI | 157159240 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC GCGCCTTATT GGTAGCAATG AGCGTGGCAA CGGTACTGAC CGGTTGCCAG
AATATGGACT CCAACGGACT GCTCTCATCA GGAGCGGAAG CTTTTCAGGC TTACAGTTTG
AGTGATGCGC AGGTGAAAAC CCTGAGCGAT CAGGCATGTC AGGAGATGGA CAGCAAGGCG
ACGATTGCGC CAGCCAATAG CGAATACGCT AAACGTCTGA CAACTATTGC CAATGCGCTA
GGCAACAATA TCAACGGTCA GCCGGTGAAT TACAAAGTGT ATATGGCGAA GGATGTGAAC
GCCTTTGCAA TGGCTAACGG CTGTATCCGC GTCTATAGCG GGCTGATGGA TATGATGACG
GATAACGAAG TCGAAGCGGT GATCGGTCAC GAAATGGGGC ACGTGGCGTT AGGCCATGTG
AAAAAAGGAA TGCAGGTGGC ACTTGGTACA AATGCCGTGC GAGTAGCTGC GGCCTCTGCG
GGCGGGATTG TCGGAAGTTT ATCTCAATCA CAACTTGGTG ATCTGGGCGA GAAATTAGTC
AATTCGCAAT TCTCCCAGCG CCAGGAAGCA GAAGCCGATG ATTATTCTTA CGATCTTCTG
CGCCAACGCG GCATCAGCCC GGCAGGTCTT GCCACCAGCT TTGAAAAACT GGCAAAACTG
GAAGAAGGTC GCCAAAGCTC AATGTTTGAC GACCATCCTG CATCCGCCGA ACGCGCCCAG
CATATTCGCG ATCGTATGAG CGCGGATGGG GTTAAGTAA
|
|---|
| Protein sequence | MKIRALLVAM SVATVLTGCQ NMDSNGLLSS GAEAFQAYSL SDAQVKTLSD QACQEMDSKA
TIAPANSEYA KRLTTIANAL GNNINGQPVN YKVYMAKDVN AFAMANGCIR VYSGLMDMMT
DNEVEAVIGH EMGHVALGHV KKGMQVALGT NAVRVAAASA GGIVGSLSQS QLGDLGEKLV
NSQFSQRQEA EADDYSYDLL RQRGISPAGL ATSFEKLAKL EEGRQSSMFD DHPASAERAQ
HIRDRMSADG VK
|
|---|
| |