Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3251 |
Symbol | mscS |
ID | 5590375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3272635 |
End bp | 3273495 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640926888 |
Product | mechanosensitive channel MscS |
Protein accession | YP_001464260 |
Protein GI | 157155517 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATT TGAATGTTGT CGATAGCATA AACGGCGCGG GAAGCTGGCT GGTAGCTAAC CAGGCGCTGC TGCTAAGTTA TGCAGTAAAC ATCGTGGCGG CACTCGCGAT CATCATCGTT GGTTTGATTA TCGCGCGGAT GATTTCCAAC GCGGTGAATC GCCTGATGAT CTCCCGTAAA ATCGATGCCA CTGTTGCTGA TTTTCTTTCT GCATTAGTCC GTTACGGTAT TATCGCCTTT ACGCTAATCG CAGCCCTGGG ACGCGTGGGT GTACAAACAG CGTCAGTCAT TGCTGTACTC GGTGCCGCAG GCTTAGCTGT TGGTCTGGCT TTGCAGGGGT CACTTTCTAA CCTGGCCGCT GGCGTGTTAC TTGTCATGTT CCGCCCGTTC CGTGCCGGAG AATATGTTGA CCTCGGCGGC GTAGCCGGTA CTGTGCTGAG TGTGCAGATT TTCTCCACCA CCATGCGTAC TGCAGACGGT AAAATTATCG TTATTCCGAA CGGTAAAATT ATTGCCGGAA ATATTATTAA CTTCTCCCGC GAGCCAGTTC GCCGTAACGA ATTTATTATT GGCGTGGCGT ATGATTCCGA TATCGATCAG GTTAAGCAGA TCCTGACCAA TATTATCCAG TCTGAAGATC GCATTTTGAA AGATCGCGAA ATGACTGTGC GCCTGAACGA ACTTGGTGCA TCGTCGATTA ATTTCGTGGT CCGCGTCTGG AGCAACAGCG GCGATCTGCA AAACGTGTAC TGGGATGTGC TGGAGCGTAT TAAACGTGAA TTTGATGCCG CCGGTATCAG CTTCCCGTAC CCGCAAATGG ATGTGAACTT TAAGCGGGTG AAAGAAGACA AAGCTGCGTA A
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Protein sequence | MEDLNVVDSI NGAGSWLVAN QALLLSYAVN IVAALAIIIV GLIIARMISN AVNRLMISRK IDATVADFLS ALVRYGIIAF TLIAALGRVG VQTASVIAVL GAAGLAVGLA LQGSLSNLAA GVLLVMFRPF RAGEYVDLGG VAGTVLSVQI FSTTMRTADG KIIVIPNGKI IAGNIINFSR EPVRRNEFII GVAYDSDIDQ VKQILTNIIQ SEDRILKDRE MTVRLNELGA SSINFVVRVW SNSGDLQNVY WDVLERIKRE FDAAGISFPY PQMDVNFKRV KEDKAA
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