Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3216 |
Symbol | lysS |
ID | 5588512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3237118 |
End bp | 3238635 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640926856 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001464228 |
Protein GI | 157155962 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAC AACACGCACA GGGCGCTGAC GCGGTAGTCG ATCTTAACAA TGAACTGAAA ACGCGTCGTG AGAAGCTGGC GAACCTGCGC GAGCAGGGGA TTGCCTTCCC GAACGATTTC CGTCGCGATC ATACCTCTGA CCAATTGCAC GCAGAATTCG ACGGTAAAGA GAACGAAGAA CTGGAAGCGC TGAACATCGA AGTCGCCGTT GCTGGCCGCA TGATGACCCG TCGTATTATG GGTAAAGCGT CTTTCGTTAC CCTGCAGGAC GTTGGCGGTC GCATTCAGCT GTACGTTGCC CGTGACGATC TGCCGGAAGG CGTTTACAAC GAGCAGTTCA AAAAATGGGA CCTCGGCGAC ATCCTCGGCG CGAAAGGTAA ACTGTTCAAA ACCAAAACCG GCGAACTGTC TATCCACTGT ACCGAGCTGC GTCTGCTGAC CAAAGCACTG CGTCCGCTGC CGGATAAATT CCACGGCTTG CAGGATCAGG AAGCGCGCTA TCGTCAGCGT TATTTGGATC TCATCTCTAA CGATGAATCC CGTAACACCT TTAAAGTACG CTCGCAGATC CTCTCTGGTA TTCGCCAGTT CATGGTGAAC CGCGGCTTTA TGGAAGTTGA AACGCCGATG ATGCAGGTGA TCCCTGGCGG TGCCGCTGCG CGTCCGTTTA TCACCCACCA TAACGCGCTG GATCTCGACA TGTACCTGCG TATCGCGCCG GAACTGTACC TCAAGCGTCT GGTGGTCGGT GGCTTCGAGC GTGTATTCGA AATCAACCGT AACTTCCGTA ACGAAGGTAT CTCCGTACGT CATAACCCAG AGTTCACCAT GATGGAACTC TACATGGCTT ACGCAGATTA CAAAGATCTG ATCGAGCTGA CCGAATCGCT GTTCCGTACT CTGGCACAGG ATATTCTCGG TAAGACGGAA GTGACCTACG GCGACGTGAC GCTGGACTTC GGTAAACCGT TCGAAAAACT GACCATGCGT GAAGCGATCA AGAAATATCG CCCGGAAACC GACATGGCGG ATCTGGATAA CTTCGACTCT GCGAAAGCGA TTGCTGAATC TATCGGTATC CACGTTGAGA AGAGCTGGGG TCTGGGCCGT ATCGTTACCG AGATCTTCGA AGAAGTGGCA GAAGCACATC TGATTCAGCC GACCTTCATT ACTGAATATC CGGCAGAAGT TTCTCCGCTG GCGCGTCGTA ACGACATTAA CCCGGAAATC ACAGACCGCT TTGAGTTCTT CATCGGTGGT CGTGAAATCG GTAACGGCTT TAGCGAGCTG AATGACGCGG AAGATCAGGC GCAACGCTTC CTGGATCAGG TTGCCGCGAA AGACGCAGGT GACGACGAAG CGATGTTCTA CGATGAAGAT TACGTTACCG CACTGGAACA TGGCTTACCG CCGACAGCAG GTCTGGGGAT TGGCATCGAC CGTATGGTAA TGCTGTTCAC CAACAGCCAT ACCATCCGCG ACGTTATTCT GTTCCCGGCG ATGCGTCCGG TAAAATAA
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Protein sequence | MSEQHAQGAD AVVDLNNELK TRREKLANLR EQGIAFPNDF RRDHTSDQLH AEFDGKENEE LEALNIEVAV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDDLPEGVYN EQFKKWDLGD ILGAKGKLFK TKTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEARYRQR YLDLISNDES RNTFKVRSQI LSGIRQFMVN RGFMEVETPM MQVIPGGAAA RPFITHHNAL DLDMYLRIAP ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYKDL IELTESLFRT LAQDILGKTE VTYGDVTLDF GKPFEKLTMR EAIKKYRPET DMADLDNFDS AKAIAESIGI HVEKSWGLGR IVTEIFEEVA EAHLIQPTFI TEYPAEVSPL ARRNDINPEI TDRFEFFIGG REIGNGFSEL NDAEDQAQRF LDQVAAKDAG DDEAMFYDED YVTALEHGLP PTAGLGIGID RMVMLFTNSH TIRDVILFPA MRPVK
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