Gene EcE24377A_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3216 
SymbollysS 
ID5588512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3237118 
End bp3238635 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content53% 
IMG OID640926856 
Productlysyl-tRNA synthetase 
Protein accessionYP_001464228 
Protein GI157155962 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC AACACGCACA GGGCGCTGAC GCGGTAGTCG ATCTTAACAA TGAACTGAAA 
ACGCGTCGTG AGAAGCTGGC GAACCTGCGC GAGCAGGGGA TTGCCTTCCC GAACGATTTC
CGTCGCGATC ATACCTCTGA CCAATTGCAC GCAGAATTCG ACGGTAAAGA GAACGAAGAA
CTGGAAGCGC TGAACATCGA AGTCGCCGTT GCTGGCCGCA TGATGACCCG TCGTATTATG
GGTAAAGCGT CTTTCGTTAC CCTGCAGGAC GTTGGCGGTC GCATTCAGCT GTACGTTGCC
CGTGACGATC TGCCGGAAGG CGTTTACAAC GAGCAGTTCA AAAAATGGGA CCTCGGCGAC
ATCCTCGGCG CGAAAGGTAA ACTGTTCAAA ACCAAAACCG GCGAACTGTC TATCCACTGT
ACCGAGCTGC GTCTGCTGAC CAAAGCACTG CGTCCGCTGC CGGATAAATT CCACGGCTTG
CAGGATCAGG AAGCGCGCTA TCGTCAGCGT TATTTGGATC TCATCTCTAA CGATGAATCC
CGTAACACCT TTAAAGTACG CTCGCAGATC CTCTCTGGTA TTCGCCAGTT CATGGTGAAC
CGCGGCTTTA TGGAAGTTGA AACGCCGATG ATGCAGGTGA TCCCTGGCGG TGCCGCTGCG
CGTCCGTTTA TCACCCACCA TAACGCGCTG GATCTCGACA TGTACCTGCG TATCGCGCCG
GAACTGTACC TCAAGCGTCT GGTGGTCGGT GGCTTCGAGC GTGTATTCGA AATCAACCGT
AACTTCCGTA ACGAAGGTAT CTCCGTACGT CATAACCCAG AGTTCACCAT GATGGAACTC
TACATGGCTT ACGCAGATTA CAAAGATCTG ATCGAGCTGA CCGAATCGCT GTTCCGTACT
CTGGCACAGG ATATTCTCGG TAAGACGGAA GTGACCTACG GCGACGTGAC GCTGGACTTC
GGTAAACCGT TCGAAAAACT GACCATGCGT GAAGCGATCA AGAAATATCG CCCGGAAACC
GACATGGCGG ATCTGGATAA CTTCGACTCT GCGAAAGCGA TTGCTGAATC TATCGGTATC
CACGTTGAGA AGAGCTGGGG TCTGGGCCGT ATCGTTACCG AGATCTTCGA AGAAGTGGCA
GAAGCACATC TGATTCAGCC GACCTTCATT ACTGAATATC CGGCAGAAGT TTCTCCGCTG
GCGCGTCGTA ACGACATTAA CCCGGAAATC ACAGACCGCT TTGAGTTCTT CATCGGTGGT
CGTGAAATCG GTAACGGCTT TAGCGAGCTG AATGACGCGG AAGATCAGGC GCAACGCTTC
CTGGATCAGG TTGCCGCGAA AGACGCAGGT GACGACGAAG CGATGTTCTA CGATGAAGAT
TACGTTACCG CACTGGAACA TGGCTTACCG CCGACAGCAG GTCTGGGGAT TGGCATCGAC
CGTATGGTAA TGCTGTTCAC CAACAGCCAT ACCATCCGCG ACGTTATTCT GTTCCCGGCG
ATGCGTCCGG TAAAATAA
 
Protein sequence
MSEQHAQGAD AVVDLNNELK TRREKLANLR EQGIAFPNDF RRDHTSDQLH AEFDGKENEE 
LEALNIEVAV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDDLPEGVYN EQFKKWDLGD
ILGAKGKLFK TKTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEARYRQR YLDLISNDES
RNTFKVRSQI LSGIRQFMVN RGFMEVETPM MQVIPGGAAA RPFITHHNAL DLDMYLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYKDL IELTESLFRT
LAQDILGKTE VTYGDVTLDF GKPFEKLTMR EAIKKYRPET DMADLDNFDS AKAIAESIGI
HVEKSWGLGR IVTEIFEEVA EAHLIQPTFI TEYPAEVSPL ARRNDINPEI TDRFEFFIGG
REIGNGFSEL NDAEDQAQRF LDQVAAKDAG DDEAMFYDED YVTALEHGLP PTAGLGIGID
RMVMLFTNSH TIRDVILFPA MRPVK