| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3212 |
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| Symbol | |
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| ID | 5590376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3232474 |
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| End bp | 3234393 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640926852 |
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| Product | putative oxidoreductase Fe-S binding subunit |
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| Protein accession | YP_001464224 |
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| Protein GI | 157159085 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1142] Fe-S-cluster-containing hydrogenase components 2 |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.845239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGT TTATCGCTGC TGAAGCTGCG GAATGTATAG GCTGTCATGC TTGTGAAATT
GCCTGTGCGG TGGCACACAA TCAAGAAAAC TGGCCGCTGA GTCACAGTGA CTTTCGACCG
CGTATCCACG TTGTAGGGAA AGGCCAGGCT GCGAATCCGG TGGCCTGCCA TCACTGCAAC
AATGCCCCTT GCGTTACGGC TTGTCCGGTT AATGCTCTGA CTTTCCAGTC CGATAGCGTA
CAACTGGACG AGCAAAAATG TATTGGCTGT AAAAGATGCG CAATCGCTTG CCCCTTTGGC
GTCGTTGAGA TGGTCGATAC GATTGCGCAG AAATGCGACC TTTGTAACCA GCGCAGTTCC
GGCACGCAAG CCTGTATTGA AGTCTGCCCA ACACAGGCGT TACGACTGAT GGACGATAAA
GGGTTACAGC AGATAAAGGT GGCCCGCCAG CGCAAAACGG CAGCAGGAAA AGCGTCATCA
GACGCTCAGC CATCTCGCAG TGCAGCGTTG CTCCCCGTTA ACTCGCGTAA AGGCGCAGAT
AAAATTTCAG CGAGTGAACG GAAAACCCAC TTTGGCGAAA TATATTGCGG GCTGGATCCA
CAACAAGCGA CTTATGAGAG TGACCGCTGT GTTTATTGTG CCGAAAAAGC TAACTGCAAC
TGGCATTGCC CGCTGCATAA CGCTATTCCG GATTACATCC GTCTGGTACA GGAAGGAAAG
ATTATTGAAG CGGCAGAACT TTGCCACCAG ACCAGTTCCT TACCAGAAAT TTGCGGCAGG
GTATGTCCAC AGGACCGTCT TTGTGAAGGC GCATGTACTT TGAAAGATCA CTCGGGCGCA
GTCTCTATCG GTAATCTGGA ACGCTACATC ACCGATACCG CGCTGGCGAT GGGCTGGCGT
CCCGATGTCA GCAAAGTTGT TCCCCGTATC GAAAAAGTGG CGGTGATTGG CGCTGGGCCA
GCAGGGTTAG GGTGTGCTGA TATTCTGGCG CGCGCGGGAG TTCAGGTTGA TGTCTTTGAT
CGCCATCCAG AAATTGGCGG TATGCTGACT TTTGGCATTC CTCCTTTCAA ACTCGATAAA
ACGGTATTAA GCCAGCGGCG AGAGATATTC ACCGCAATGG GAATCGACTT TCATCTTAAC
TGTGAAATTG GCCGCGATAT TACCTTTAGC GATTTAACTT CTGAATATGA TGCAGTTTTC
ATCGGCGTGG GGACTTACGG GATGATGCGA GCAGATCTGC CGCATGAAGA TGCGCCCGGT
GTCATTCAGG CTCTACCGTT CCTGACTGCC CATACCCGCC AGCTCATGGG ATTGCCGGAG
TCTGAAGAGT ATCCGCTGAC GGACGTGGAA GGTAAGCGAG TCGTGGTATT GGGCGGTGGC
GATACGACAA TGGATTGTTT GCGGACTTCC ATCCGCCTCA ATGCCGCCAG CGTGACCTGC
GCGTATCGTC GTGATGAAGT CAGTATGCCG GGCTCGCGCA AAGAGGTGGT TAATGCGCGC
GAGGAAGGTG TCGAGTTTCA GTTCAATGTT CAACCGCAAT ATATCGCTTG TGACGAAGAT
GGGCGTTTAA CTGCGGTGGG CCTGATTCGT ACCGCCATGG GTGAGCCGGG GCCGGATGGT
CGCCGTCGTC CTCGTCCGGT AGCGGGTTCA GAGTTTGAAT TGCCCGCCGA TGTTCTGATT
ATGGCCTTTG GTTTCCAGGC GCATGCCATG CCGTGGTTGC AGGGCAGCGG AATTAAACTC
GATAAATGGG GCCTGATTCA AACCGGTGAC GTCGGGTATT TACCTACCCA GACGCATCTG
AAAAAAGTCT TTGCTGGTGG TGATGCAGTT CATGGCGCGG ATCTGGTTGT CACTGCAATG
GCCGCAGGAA GGCAGGCGGC GCGCGATATG TTAACTCTGT TTGATACGAA GGCATCGTGA
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| Protein sequence | MNKFIAAEAA ECIGCHACEI ACAVAHNQEN WPLSHSDFRP RIHVVGKGQA ANPVACHHCN
NAPCVTACPV NALTFQSDSV QLDEQKCIGC KRCAIACPFG VVEMVDTIAQ KCDLCNQRSS
GTQACIEVCP TQALRLMDDK GLQQIKVARQ RKTAAGKASS DAQPSRSAAL LPVNSRKGAD
KISASERKTH FGEIYCGLDP QQATYESDRC VYCAEKANCN WHCPLHNAIP DYIRLVQEGK
IIEAAELCHQ TSSLPEICGR VCPQDRLCEG ACTLKDHSGA VSIGNLERYI TDTALAMGWR
PDVSKVVPRI EKVAVIGAGP AGLGCADILA RAGVQVDVFD RHPEIGGMLT FGIPPFKLDK
TVLSQRREIF TAMGIDFHLN CEIGRDITFS DLTSEYDAVF IGVGTYGMMR ADLPHEDAPG
VIQALPFLTA HTRQLMGLPE SEEYPLTDVE GKRVVVLGGG DTTMDCLRTS IRLNAASVTC
AYRRDEVSMP GSRKEVVNAR EEGVEFQFNV QPQYIACDED GRLTAVGLIR TAMGEPGPDG
RRRPRPVAGS EFELPADVLI MAFGFQAHAM PWLQGSGIKL DKWGLIQTGD VGYLPTQTHL
KKVFAGGDAV HGADLVVTAM AAGRQAARDM LTLFDTKAS
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