| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3184 |
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| Symbol | spaP |
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| ID | 5586522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3199048 |
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| End bp | 3199713 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640926824 |
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| Product | surface presentation of antigens protein SpaP |
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| Protein accession | YP_001464197 |
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| Protein GI | 157159039 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAATA GCATTTCGCT GATAGCGATA TTATCATTAT TTACACTATT GCCGTTTATA
ATAGCATCCG GGACATGTTT TATTAAATTC TCGATTGTTT TTGTTATTGT CCGAAAAGCG
CTGGGACTTC AGCAAGTGCC ATCAAATATG ACACTTAATG GGGTTGCTTT GCTATTGTCA
ATGTTCGTAA TGATGCCGGT TGGGAAGGAA ATATATAATA ACAGTCAGAA TGAGAATCTT
TCATTCAATA ATGTAGCATC AGTTGTTAAT TTTGTTGAGA CAGGCATGAG TGGTTATAAA
TCATATTTGA TAAAATATTC TGAACCTGAG TTGGTTAGCT TTTTTGAAAA GATTCAGAAG
GTGAATAGTT CTGAAGACAA TGAAGAGATA ATCGATGATG ATAATATTTC AATTTTCTCG
TTACTGCCCG CATATGCATT GAGTGAGATA AAAAGTGCAT TTATTATAGG TTTTTATATC
TATTTACCCT TTGTCGTAGT GGATCTGGTT ATATCCAGCG TTCTGTTAAC GTTAGGTATG
ATGATGATGA GTCCGGTAAC CATATCTACA CCGATAAAAT TAATTTTGTT TGTCGCGATG
GACGGTTGGA CAATGTTATC AAAAGGGCTA ATTTTACAAT ATTTTGACCT ATCCATTAAT
CCCTGA
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| Protein sequence | MSNSISLIAI LSLFTLLPFI IASGTCFIKF SIVFVIVRKA LGLQQVPSNM TLNGVALLLS
MFVMMPVGKE IYNNSQNENL SFNNVASVVN FVETGMSGYK SYLIKYSEPE LVSFFEKIQK
VNSSEDNEEI IDDDNISIFS LLPAYALSEI KSAFIIGFYI YLPFVVVDLV ISSVLLTLGM
MMMSPVTIST PIKLILFVAM DGWTMLSKGL ILQYFDLSIN P
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