| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3177 |
|---|
| Symbol | eprK |
|---|
| ID | 5586820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3193251 |
|---|
| End bp | 3193985 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640926819 |
|---|
| Product | type III secretion apparatus lipoprotein EprK |
|---|
| Protein accession | YP_001464192 |
|---|
| Protein GI | 157157566 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
|---|
| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA TATCATTATT ATTGTTTATC CTGCTGTTGT GCGGCTGCAA GCAGCAGGAA
TTATTGAACC ATCTTGATCA ACAGCAAGCT AATGATGTCC TTGCTGTTTT ACAAAGACAT
AATATTAATG CTGAAAAGAA GGATCAAGGC AAAACAGGAT TTTCAATATT TGTCGAACCA
ACGGATTTTG CTTCTGCGGT GGATTGGCTA AAAATCTACA ATCTACCGGG TAAGCCTGAT
ATTCAAATAT CGCAGATGTT CCCTGCAGAT GCACTCGTTT CATCTCCACG AGCGGAAAAA
GCAAGGCTAT ATTCTGCTAT TGAGCAGCGG TTAGAGCAAT CTCTCAAAAT TATGGATGGC
ATTATTTCTT CGAGAGTACA TGTTAGTTAC GATGTTGATA ATGGCGATAG TGGTAAAACT
GCTTTACCAA TTCATATTTC TGTACTTGCA GTATATGAAA AAGATATCAA CCCAGAAATA
AAAATAAATG ATATCAAGAG ATTTATTGTT AATAGCTCTG CAAGCGTACA ATATGAAAAT
ATTTCTGTTG TATTGTCAAA ACGAAGAGAC ATTATTGAGC AAGCACCAAC ATATGAAATT
AGCGAACCTG TTTTTGCTTA TGATAAGGCT ATGCCGGTTT CTATCTTACT TGCATTAATA
TCCGTAGCGA CTTGCTGGCT GTTATGGAAG TATAGGGCCA TTCTAACTAA TTTAGTCAGG
TTGAAAATTA AGTAG
|
|---|
| Protein sequence | MKYISLLLFI LLLCGCKQQE LLNHLDQQQA NDVLAVLQRH NINAEKKDQG KTGFSIFVEP
TDFASAVDWL KIYNLPGKPD IQISQMFPAD ALVSSPRAEK ARLYSAIEQR LEQSLKIMDG
IISSRVHVSY DVDNGDSGKT ALPIHISVLA VYEKDINPEI KINDIKRFIV NSSASVQYEN
ISVVLSKRRD IIEQAPTYEI SEPVFAYDKA MPVSILLALI SVATCWLLWK YRAILTNLVR
LKIK
|
|---|
| |