Gene EcE24377A_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3139 
SymbolrecD 
ID5589534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3147326 
End bp3149152 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content55% 
IMG OID640926781 
Productexonuclease V subunit alpha 
Protein accessionYP_001464154 
Protein GI157155694 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01447] exodeoxyribonuclease V, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGC AAAAGCAATT ACTGGAAGCT GTGGAGCACA AACAGCTACG CCCGCTGGAT 
GTGCAATTTG CCCTGACCGT GGCGGGAGAT GAACATCCTG CCGTCACCCT CGCGGCGGCA
CTGTTAAGTC ATGATGCCGG AGAGGGACAC GTTTGTTTGC CGCTTTCACG ACTGGAAAAT
AACGAGGCGT CGCATCCGCT GTTGGCGACC TGTGTCAGTG AAATCGGTGA GCTACAAAAT
TGGGAAGAAT GCTTGCTGGC TTCTCAAGCG GTCAGCAGGG GAGATGAACC CACGCCGATG
ATCCTCTGTG GCGATCGTCT TTATTTGAAT CGCATGTGGT GTAACGAGCG CACAGTGGCA
CGCTTTTTCA ACGAAGTGAA TCATGCCATT GAGGTTGATG AAGCTCTACT GGCGCAAACC
CTGGACAAAC TTTTTCCAGT AAGCGATGAA ATTAACTGGC AAAAAGTTGC GGCGGCAGTG
GCGCTGACGC GGCGGATCTC GGTGATTTCC GGCGGCCCTG GCACCGGTAA AACGACCACC
GTAGCGAAGT TGCTGGCAGC GTTAATTCAA ATGGCCGACG GCGAACGCTG CCGTATCCGT
CTGGCTGCAC CAACGGGTAA AGCTGCCGCG CGCTTAACCG AATCTCTCGG CAAGGCTTTG
CGACAGTTAC CGCTGACCGA TGAACAAAAG AAACGCATTC CGGAAGATGC CAGCACTTTG
CACCGATTGC TGGGCGCGCA GCCGGGTAGC CAGCGTTTAC GTCATCATGC CGGTAACCCG
CTGCATCTTG ATGTGCTGGT GGTAGATGAA GCGTCAATGA TCGATCTGCC TATGATGTCG
AGACTGATCG ACGCCTTGCC CGATCATGCG CGAGTGATCT TTCTCGGCGA TCGTGATCAA
CTGGCCTCGG TTGAGGCTGG GGCTGTGCTG GGCGATATCT GCGCTTATGC CAACGCGGGC
TTTACCGCCG AGCGTGCCAG GCAGCTAAGC CGCCTGACGG GGACTCACGT TCCGGCAGGA
ACCGGCACAG AAGCGGCATC TTTGCGCGAC AGTCTCTGCC TGCTGCAAAA AAGCTATCGT
TTCGGCAGCG ATTCTGGCAT TGGTCAGTTA GCTGCGGCGA TCAACCGTGG TGATAAAACG
GCAGTGAAAA CCGTTTTTCA GCAGGATTTT ACTGATATCG AAAAACGGCT TTTACAGAGC
GGCGAAGATT ATATTGCGAT GCTTGAGGAA GCTCTTGCGG GTTACGGACG TTATCTGGAT
CTGCTGCAAG CGCGTGCCGA GCCGGATTTA ATCATTCAGG CGTTCAATGA GTACCAGCTT
TTGTGCGCCC TGCGGGAAGG GCCGTTTGGC GTGGCTGGAC TGAATGAGCG AATTGAGCAG
TTTATGCAAC AGAAGCGCAA AATTCATCGT CATCCGCACT CTCGTTGGTA CGAAGGTCGA
CCGGTGATGA TTGCCCGTAA TGACAGCGCG CTTGGGTTGT TTAATGGCGA TATCGGTATT
GCGCTGGATC GCGGGCAGGG GACGCGCGTC TGGTTTGCGA TGCCGGACGG CAATATTAAG
TCTGTGCAAC CGAGTCGCTT GCCAGAGCAC GAAACTACGT GGGCGATGAC GGTACATAAA
TCGCAGGGAT CGGAGTTCGA CCATGCGGCG TTGATTTTGC CGAGCCAACG CACGCCGGTA
GTAACGCGAG AGCTGGTTTA TACCGCGGTG ACCCGCGCGC GTCGCCGTCT GTCGCTGTAT
GCCGATGAGC GCATATTAAG TGCGGCAATC GCCACTCGTA CTGAGCGGCG CAGTGGTCTG
GCGGCGTTGT TTAGTTCACG GGAATAA
 
Protein sequence
MKLQKQLLEA VEHKQLRPLD VQFALTVAGD EHPAVTLAAA LLSHDAGEGH VCLPLSRLEN 
NEASHPLLAT CVSEIGELQN WEECLLASQA VSRGDEPTPM ILCGDRLYLN RMWCNERTVA
RFFNEVNHAI EVDEALLAQT LDKLFPVSDE INWQKVAAAV ALTRRISVIS GGPGTGKTTT
VAKLLAALIQ MADGERCRIR LAAPTGKAAA RLTESLGKAL RQLPLTDEQK KRIPEDASTL
HRLLGAQPGS QRLRHHAGNP LHLDVLVVDE ASMIDLPMMS RLIDALPDHA RVIFLGDRDQ
LASVEAGAVL GDICAYANAG FTAERARQLS RLTGTHVPAG TGTEAASLRD SLCLLQKSYR
FGSDSGIGQL AAAINRGDKT AVKTVFQQDF TDIEKRLLQS GEDYIAMLEE ALAGYGRYLD
LLQARAEPDL IIQAFNEYQL LCALREGPFG VAGLNERIEQ FMQQKRKIHR HPHSRWYEGR
PVMIARNDSA LGLFNGDIGI ALDRGQGTRV WFAMPDGNIK SVQPSRLPEH ETTWAMTVHK
SQGSEFDHAA LILPSQRTPV VTRELVYTAV TRARRRLSLY ADERILSAAI ATRTERRSGL
AALFSSRE