Gene EcE24377A_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3124 
Symbol 
ID5587803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3128789 
End bp3130327 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content51% 
IMG OID640926766 
Producthypothetical protein 
Protein accessionYP_001464139 
Protein GI157155143 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAC AACAAGAACA TGCCACCTCT GAAACTGCAA CACTGACCAC CACTGAGTCC 
GGCGGCGTTT ATCAGTCCCT GTTTGATAAA ATTAATTTAA CCCCGGTGTC TTCCATTCAG
GAAATAGATT TATGGCAAAA CAGCGAAACA CTGGCGGATG CCTCACCCGA TGAGCGCGTG
ACAGCGGCGA TTCACGTTCT ACTTTCCTGT CTGGCGAAAT CAGGCGAGAA CGTGGTCAAG
CTCGACAAGA GCCTGCTGGA TTTTCATATC GACGATTTGG ATCAGAAAAT CAGTAAACAG
CTTGATGCGG TCATGCACCA TCCTGAATTC CAGAAAGTCG AGTCGCTGTG GCGCGGCACA
TGGTTCGTCG TACAGCGCAC TGATTTTCGC AAAAATGTCA GAATTGAATT GCTGGATATC
AGCAAAGAGC ATCTGCGTCA GGATTTCGAC GACTCCCCGG AAATCATTCA GAGCGGTTTA
TATCGTCATA CATACATTCA GGAGTACGAT ACGCCGGGTG GCGAACCTGT TGCCTCATTA
ATTTCCAGCT ATGAATTTGA TAACAGCCCG CAGGATATTG CCCTGCTGCG CAATATTTCC
AGAGTGTCTG CCGCTTCCCA TATGCCTTTT ATCGGTTCTG TCGGGCCGAA ATTCTTCCTT
AAAAATTCGA TGGAAGAAGT CGCCGCGATT AAAGATATCG GCAACTACTT TGACCGCGCA
GAATATATTA AATGGAAATC GTTTCGTGAT ACCGATGACA GCCGCTATGT GGGATTAGTG
ATGCCGCGAG TGCTGGGCCG TCTGCCCTAT GGGCCGGACA CGGTGCCGGT ACGCAGCTTT
AACTATGTGG AAGAAGTCAA AGGCCCGGAT CACGAAAAGT ATCTCTGGAC AAACGCCTCG
TTCGCCTTTG CCGCCAATAT GGTGAAGAGC TTTGTGAATA ATGGCTGGTG CGTGCAGATC
CGTGGTCCAC AAGCAGGTGG CGCAGTGGCC GATCTGCCCA TCCATCTTTA CGATCTCGGC
ACCGGCAATC AGGTCAAAAT TCCGTCCGAA GTGATGATCC CGGAAACCCG CGAATTTGAA
TTTTCCAACC TTGGCTTTAT TCCGCTCTCT TATTATAAGA ATCGCGATTA CGCCTGCTTC
TTCTCGGCAA ACTCTGCCCA GAAACCGGCG TTGTATGATA CCGCTGACGC CACCGCCAAC
AGCCGTATTA ACGCCCGTCT GCCCTATATC TTCCTGCTGT CCCGCATTGC GCATTACCTG
AAAATCATCC AGCGCGAGAA TATCGGTACC ACCAAAGACC GCCGCGTACT GGAACTGGAA
CTGAACACCT GGATCCGCAC ACTGGTGACG GAGATGACCG ATCCGGGTGA TGAACTGCAG
GCGTCTCACC CGCTGCGCGA CGGTAAGGTT ATCGTGGAAG ATATTGAGGA CAATCCGGGC
TTCTTCCGCG TCAGACTCTT TGCCGTGCCG CATTTCCAGA TTGAAGGGAT GGATATCAAC
CTGTCACTGG TTTCCCAGAT GCCGAAAGCG AAAGCCTGA
 
Protein sequence
MSVQQEHATS ETATLTTTES GGVYQSLFDK INLTPVSSIQ EIDLWQNSET LADASPDERV 
TAAIHVLLSC LAKSGENVVK LDKSLLDFHI DDLDQKISKQ LDAVMHHPEF QKVESLWRGT
WFVVQRTDFR KNVRIELLDI SKEHLRQDFD DSPEIIQSGL YRHTYIQEYD TPGGEPVASL
ISSYEFDNSP QDIALLRNIS RVSAASHMPF IGSVGPKFFL KNSMEEVAAI KDIGNYFDRA
EYIKWKSFRD TDDSRYVGLV MPRVLGRLPY GPDTVPVRSF NYVEEVKGPD HEKYLWTNAS
FAFAANMVKS FVNNGWCVQI RGPQAGGAVA DLPIHLYDLG TGNQVKIPSE VMIPETREFE
FSNLGFIPLS YYKNRDYACF FSANSAQKPA LYDTADATAN SRINARLPYI FLLSRIAHYL
KIIQRENIGT TKDRRVLELE LNTWIRTLVT EMTDPGDELQ ASHPLRDGKV IVEDIEDNPG
FFRVRLFAVP HFQIEGMDIN LSLVSQMPKA KA