| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3057 |
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| Symbol | cas1 |
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| ID | 5589688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3057621 |
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| End bp | 3058541 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640926701 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001464077 |
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| Protein GI | 157155405 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.82457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTTTG TACCACTGAG CCCGATCCCA TTAAAAGATC GCACCACCAT GATCTTCCTC
CAGTACGGTC AGATCGACGT ACTGGACGGC GCTTTCGTGC TGATCGACAA AACAGGGATC
CGCACACATA TTCCGGTAGG ATCGGTCGCC TGCATTATGC TCGAACCGGG AACGAGAGTT
TCCCACGCGG CGGTGCATCT GGCCGCCACG GTGGGAACAC TGCTGGTCTG GGTCGGTGAA
GCGGGCGTTC GCGTTTACTC ATCCGGACAA CCCGGAGGGG CGCGGGCAGA TAAATTACTC
TACCAGGCAA AGCTGGCTTT AACGGAAGAT CTACGCCTGA AGGTGGTGCG CAAAATGTAT
GAATTACGTT TTCGTGAGCC ACCGCCAGCT CGCCGTTCAG TGGAGCAGCT ACGTGGAATT
GAGGGATCTC GCGTTCGCCA GACGTATGCA TTACTGGCGA AACAATATGG TGTGAAATGG
AATGGTCGCA AATACGATCC TAAAGACTGG GAAAAAGGCG ATGTTGTGAA TCGCTGCATC
AGTGCTGCTA CATCATGTCT GTACGGTATA TCTGAAGCGG CAGTATTAGC CGCGGGATAT
GCGCCCGCTA TTGGGTTTAT CCATAGTGGC AAACCGCTTT CATTTGTTTA TGACATAGCC
GATATCATTA AATTTGATTC GGTTGTACCA AAGGCATTTG AAATAGCGGC GAGGCAACCC
GCAGAACCTG ATAAAGAAGT CAGATTAGCC TGTCGTGATA TTTTCCGTAG CACTAAGTTA
ACGGGCAAAT TAATACCGTT AATTGAGGAA GTCCTTGCCG CAGGTGAAAT TGAACCGCCA
CAACCTGCGC CGGATATGTT ACCGCCAGCC ATCCCCGAAC CTGAAACGTT GGGCGATAGC
GGTCATCGAG GACGCGGCTG A
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| Protein sequence | MTFVPLSPIP LKDRTTMIFL QYGQIDVLDG AFVLIDKTGI RTHIPVGSVA CIMLEPGTRV
SHAAVHLAAT VGTLLVWVGE AGVRVYSSGQ PGGARADKLL YQAKLALTED LRLKVVRKMY
ELRFREPPPA RRSVEQLRGI EGSRVRQTYA LLAKQYGVKW NGRKYDPKDW EKGDVVNRCI
SAATSCLYGI SEAAVLAAGY APAIGFIHSG KPLSFVYDIA DIIKFDSVVP KAFEIAARQP
AEPDKEVRLA CRDIFRSTKL TGKLIPLIEE VLAAGEIEPP QPAPDMLPPA IPEPETLGDS
GHRGRG
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