| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3048 |
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| Symbol | ispD |
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| ID | 5586078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3050550 |
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| End bp | 3051260 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640926694 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001464070 |
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| Protein GI | 157154915 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.201091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCA CTCATTTGGA TGTTTGCGCC GTGGTTCCGG CGGCCGGATT TGGCCGTCGA
ATGCAAACGG AATGTCCTAA GCAATATCTC TCAATCGGTA ATCAAACCAT TCTTGAACAC
TCGGTGCATG CGCTGCTGGC GCATCCCCGG GTGAAACGTG TCGTCATTGC CATAAGTCCT
GGCGATAGCC GTTTTGCACA ACTTCCTCTG GCGAATCATC CGCAAATCAC CGTTGTAGAT
GGCGGTGATG AGCGTGCCGA TTCCGTGCTG GCAGGTTTGA AAGCCGCTGG CGACGCGCAG
TGGGTATTGG TGCATGACGC CGCTCGTCCT TGTCTGCATC AGGATGACCT CGCGCGATTG
TTGGCGTTGA GCGAAACCAG CCGCACGGGA GGGATCCTAG CCGCACCAGT GCGCGATACG
ATGAAACGTG CCGAACCGGG CAAAAATGCC ATTGCTCATA CCGTTGATCG CAACGGCTTA
TGGCACGCGC TGACGCCGCA ATTTTTCCCT CGTGAGCTGT TACATGACTG TCTGACGCGC
GCTCTAAATG AAGGCGCGAC TATTACCGAC GAAGCCTCGG CGCTGGAATA TTGCGGATTC
CATCCTCAGT TGGTCGAAGG CCGTGCGGAT AACATTAAAG TCACGCGCCC GGAAGATTTG
GCACTGGCCG AGTTTTACCT CACCCGAACC ATCCATCAGG AGAATACATA A
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| Protein sequence | MATTHLDVCA VVPAAGFGRR MQTECPKQYL SIGNQTILEH SVHALLAHPR VKRVVIAISP
GDSRFAQLPL ANHPQITVVD GGDERADSVL AGLKAAGDAQ WVLVHDAARP CLHQDDLARL
LALSETSRTG GILAAPVRDT MKRAEPGKNA IAHTVDRNGL WHALTPQFFP RELLHDCLTR
ALNEGATITD EASALEYCGF HPQLVEGRAD NIKVTRPEDL ALAEFYLTRT IHQENT
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