Gene EcE24377A_3047 details

Gene Information

• Locus tag: EcE24377A_3047
• Symbol: ispF
• ID: 5590724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 3050071
• End bp: 3050550
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640926693
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001464069
• Protein GI: 157156836
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.24018
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATTG GACACGGTTT TGACGTACAT GCCTTTGGCG GTGAAGGCCC AATTATCATT 
GGTGGCGTAC GCATTCCTTA CGAAAAAGGA TTGCTGGCGC ATTCTGATGG CGACGTGGCG 
CTCCATGCGT TGACCGATGC ATTGCTTGGC GCGGCGGCGC TGGGGGATAT CGGCAAGCTG 
TTCCCGGATA CCGATCCGGC ATTTAAAGGT GCCGACAGCC GCGAGCTGCT ACGCGAAGCC 
TGGCGTCGTA TTCAGGCGAA GGGTTATACC CTGGGCAACG TCGATGTCAC TATCATCGCT 
CAGGCACCGA AGATGTTGCC GCACATTCCA CAAATGCGCG TGTTTATTGC CGAAGATCTC 
GGCTGCCATA TGGATGATGT TAACGTGAAA GCCACTACTA CGGAAAAACT TGGATTTACC 
GGACGTGGGG AAGGGATTGC CTGTGAAGCG GTGGCGCTAC TCATTAAGGC AACAAAATGA 

 

Protein sequence

MRIGHGFDVH AFGGEGPIII GGVRIPYEKG LLAHSDGDVA LHALTDALLG AAALGDIGKL 
FPDTDPAFKG ADSRELLREA WRRIQAKGYT LGNVDVTIIA QAPKMLPHIP QMRVFIAEDL 
GCHMDDVNVK ATTTEKLGFT GRGEGIACEA VALLIKATK