Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3015 |
Symbol | hypB |
ID | 5588845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3014192 |
End bp | 3015064 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640926663 |
Product | hydrogenase nickel incorporation protein HypB |
Protein accession | YP_001464039 |
Protein GI | 157158311 |
COG category | [K] Transcription [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTACAA CATGCGGTTG CGGTGAAGGC AACCTGTATA TCGAGGGTGA TGAACATAAC CCTCATTCCG CGTTTCGTAG CGCGCCATTT GCCCCGGCGG CACGCCCGAA GATGAAAATC ACCGGCATTA AAGCGCCTGA ATTTACCCCC AGCCAGACTG AAGAAGGCGA CCTGCATTAC GGTCATGGCG AAGCGGGCAC TCACGCACCG GGCATGAGCC AGCGTCGGAT GCTGGAAGTC GAAATTGACG TGCTGGACAA AAATAACCGT CTGGCTGAAC GCAACCGCGC GCGCTTTGCT GCCCGCAAGC AACTGGTGCT CAACCTGGTT TCCAGCCCTG GTTCCGGTAA AACCACCCTG CTGACGGAAA CCCTAATGCG CCTGAAAGAC AGCGTTCCGT GCGCGGTTAT TGAAGGCGAC CAGCAAACCG TGAACGATGC CGCACGCATT CGCGCTACCG GTACACCAGC GATTCAGGTG AACACCGGTA AAGGCTGCCA TCTTGACGCA CAGATGATTG CCGACGCCGC ACCGCGTCTG CCAATGGACG ATAACGGTAT TCTGTTTATC GAAAACGTTG GCAACCTCGT ATGCCCGGCC AGCTTCGATC TCGGTGAAAA ACACAAAGTG GCGGTGCTTT CCGTTACCGA AGGTGAAGAC AAACCGCTGA AATATCCGCA TATGTTTGCC GCCGCCTCGC TGATGCTGCT CAACAAAGTT GACCTGTTGC CGTATCTCAA CTTTGACGTT GAGAAGTGCC TCGCCTGCGC CCGCGAAGTC AATCCAGAAA TTGAAATCAT CCTTATTTCC GCCACCAGCG GTGAAGGGAT GGACCAGTGG CTGAACTGGC TGGAGACACA GCGATGTGCA TAG
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Protein sequence | MCTTCGCGEG NLYIEGDEHN PHSAFRSAPF APAARPKMKI TGIKAPEFTP SQTEEGDLHY GHGEAGTHAP GMSQRRMLEV EIDVLDKNNR LAERNRARFA ARKQLVLNLV SSPGSGKTTL LTETLMRLKD SVPCAVIEGD QQTVNDAARI RATGTPAIQV NTGKGCHLDA QMIADAAPRL PMDDNGILFI ENVGNLVCPA SFDLGEKHKV AVLSVTEGED KPLKYPHMFA AASLMLLNKV DLLPYLNFDV EKCLACAREV NPEIEIILIS ATSGEGMDQW LNWLETQRCA
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