Gene EcE24377A_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3000 
SymbolascF 
ID5590656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3000193 
End bp3001650 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content56% 
IMG OID640926648 
ProductPTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC 
Protein accessionYP_001464024 
Protein GI157156159 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA ATTATGCGGC GCTGGCACGC TCGGTGATAG CGGCACTGGG CGGCGTTGAT 
AACATCTCGG CAGTCACGCA CTGTATGACG CGTTTGCGCT TTGTTATCAA AGATGACCAG
CTTATCGACA GCCCGACGTT AAAAACCATC CCCGGCGTGC TCGGCGTGGT ACGTAGTGAC
AACCAGTGTC AGGTGATTAT CGGCAATACC GTTTCACAAG CCTTTCAGGA AGTCGTCAGC
CTGCTGCCGG GAGATATGCA GCCCGTACAG CCCGTGGGTA AACCCAAACT CACGCTGCGT
CGCATTGGTG CGGGGATCCT CGATGCGCTG ATCAGCACCA TGTCACCGCT GATCCCGGCG
ATTATCGGCG GATCGATGGT CAAACTGCTG GCGATGATCC TCGAGATGAG CGGCGTGTTG
ACAAAAGGAT CGCCGACCTT AACCATTCTG AATGTGATTG GTGACGGTGC TTTCTTCTTC
CTGCCGCTAA TGGTCGCGGC ATCTGCCGCC ATCAAATTTA AAACCAATAT GTCGCTGGCG
ATTGCCATCG CAGGTGTGCT GGTACATCCG AGCTTTATTG AACTGATGGC GAAAGCGGCC
CAGGGTGAAC ATGTCGAATT TGCCCTGATT CCGGTCACCG CGGTGAAATA TACCTACACG
GTGATCCCGG CGCTGGTGAT GACCTGGTGC CTGTCATATA TCGAACGCTG GGTGGATCGC
ATTACACCGG CTGTGACCAA AAACTTCCTC AAGCCAATGC TGATTGTGTT GATTGCCGCA
CCGCTGGCAA TCCTGCTGAT TGGCCCGATT GGTATCTGGA TCGGTAGCGC CATTTCGGCG
CTGGTTTACA CCATTCATGG TTATCTGGGC TGGCTTTCAG TCGCCATTAT GGGCGCGCTG
TGGCCTCTGC TGGTAATGAC CGGGATGCAC CGCGTCTTTA CGCCAACCAT CATTCAGACC
ATTGCCGAAA CCGGCAAAGA AGGGATGGTC ATGCCGTCAG AGATCGGCGC TAACCTGTCG
CTGGGCGGTT CATCACTGGC GGTGGCGTGG AAAACGAAAA ACCCGGAACT GCGCCAGACG
GCGCTGGCTG CGGCGGCATC AGCCATTATG GCGGGGATTT CCGAACCGGC GTTATACGGC
GTGGCGATCC GCCTGAAACG TCCGCTTATC GCCAGTCTTA TCAGCGGTTT TATTTGCGGC
GCGGTTGCCG GTATGGCGGG GCTTGCCAGC CACTCAATGG CAGCGCCGGG GTTATTTACC
AGCGTGCAAT TCTTCGATCC GGCGAATCCA ATGAGCATCG TCTGGGTGTT CGCGGTCATG
GCGCTGGCGG TGGTGCTGTC GTTTATCCTC ACACTATTGC TCGGCTTTGA GGATATTCCT
GTTGAGGAAG CGGCTGCCGA GGCGCGAAAG CATCAGAGCG CACAACCGAC CGTCGCCAAA
GAAGTAAGTC TTAATTGA
 
Protein sequence
MAKNYAALAR SVIAALGGVD NISAVTHCMT RLRFVIKDDQ LIDSPTLKTI PGVLGVVRSD 
NQCQVIIGNT VSQAFQEVVS LLPGDMQPVQ PVGKPKLTLR RIGAGILDAL ISTMSPLIPA
IIGGSMVKLL AMILEMSGVL TKGSPTLTIL NVIGDGAFFF LPLMVAASAA IKFKTNMSLA
IAIAGVLVHP SFIELMAKAA QGEHVEFALI PVTAVKYTYT VIPALVMTWC LSYIERWVDR
ITPAVTKNFL KPMLIVLIAA PLAILLIGPI GIWIGSAISA LVYTIHGYLG WLSVAIMGAL
WPLLVMTGMH RVFTPTIIQT IAETGKEGMV MPSEIGANLS LGGSSLAVAW KTKNPELRQT
ALAAAASAIM AGISEPALYG VAIRLKRPLI ASLISGFICG AVAGMAGLAS HSMAAPGLFT
SVQFFDPANP MSIVWVFAVM ALAVVLSFIL TLLLGFEDIP VEEAAAEARK HQSAQPTVAK
EVSLN