Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3000 |
Symbol | ascF |
ID | 5590656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3000193 |
End bp | 3001650 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640926648 |
Product | PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC |
Protein accession | YP_001464024 |
Protein GI | 157156159 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAA ATTATGCGGC GCTGGCACGC TCGGTGATAG CGGCACTGGG CGGCGTTGAT AACATCTCGG CAGTCACGCA CTGTATGACG CGTTTGCGCT TTGTTATCAA AGATGACCAG CTTATCGACA GCCCGACGTT AAAAACCATC CCCGGCGTGC TCGGCGTGGT ACGTAGTGAC AACCAGTGTC AGGTGATTAT CGGCAATACC GTTTCACAAG CCTTTCAGGA AGTCGTCAGC CTGCTGCCGG GAGATATGCA GCCCGTACAG CCCGTGGGTA AACCCAAACT CACGCTGCGT CGCATTGGTG CGGGGATCCT CGATGCGCTG ATCAGCACCA TGTCACCGCT GATCCCGGCG ATTATCGGCG GATCGATGGT CAAACTGCTG GCGATGATCC TCGAGATGAG CGGCGTGTTG ACAAAAGGAT CGCCGACCTT AACCATTCTG AATGTGATTG GTGACGGTGC TTTCTTCTTC CTGCCGCTAA TGGTCGCGGC ATCTGCCGCC ATCAAATTTA AAACCAATAT GTCGCTGGCG ATTGCCATCG CAGGTGTGCT GGTACATCCG AGCTTTATTG AACTGATGGC GAAAGCGGCC CAGGGTGAAC ATGTCGAATT TGCCCTGATT CCGGTCACCG CGGTGAAATA TACCTACACG GTGATCCCGG CGCTGGTGAT GACCTGGTGC CTGTCATATA TCGAACGCTG GGTGGATCGC ATTACACCGG CTGTGACCAA AAACTTCCTC AAGCCAATGC TGATTGTGTT GATTGCCGCA CCGCTGGCAA TCCTGCTGAT TGGCCCGATT GGTATCTGGA TCGGTAGCGC CATTTCGGCG CTGGTTTACA CCATTCATGG TTATCTGGGC TGGCTTTCAG TCGCCATTAT GGGCGCGCTG TGGCCTCTGC TGGTAATGAC CGGGATGCAC CGCGTCTTTA CGCCAACCAT CATTCAGACC ATTGCCGAAA CCGGCAAAGA AGGGATGGTC ATGCCGTCAG AGATCGGCGC TAACCTGTCG CTGGGCGGTT CATCACTGGC GGTGGCGTGG AAAACGAAAA ACCCGGAACT GCGCCAGACG GCGCTGGCTG CGGCGGCATC AGCCATTATG GCGGGGATTT CCGAACCGGC GTTATACGGC GTGGCGATCC GCCTGAAACG TCCGCTTATC GCCAGTCTTA TCAGCGGTTT TATTTGCGGC GCGGTTGCCG GTATGGCGGG GCTTGCCAGC CACTCAATGG CAGCGCCGGG GTTATTTACC AGCGTGCAAT TCTTCGATCC GGCGAATCCA ATGAGCATCG TCTGGGTGTT CGCGGTCATG GCGCTGGCGG TGGTGCTGTC GTTTATCCTC ACACTATTGC TCGGCTTTGA GGATATTCCT GTTGAGGAAG CGGCTGCCGA GGCGCGAAAG CATCAGAGCG CACAACCGAC CGTCGCCAAA GAAGTAAGTC TTAATTGA
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Protein sequence | MAKNYAALAR SVIAALGGVD NISAVTHCMT RLRFVIKDDQ LIDSPTLKTI PGVLGVVRSD NQCQVIIGNT VSQAFQEVVS LLPGDMQPVQ PVGKPKLTLR RIGAGILDAL ISTMSPLIPA IIGGSMVKLL AMILEMSGVL TKGSPTLTIL NVIGDGAFFF LPLMVAASAA IKFKTNMSLA IAIAGVLVHP SFIELMAKAA QGEHVEFALI PVTAVKYTYT VIPALVMTWC LSYIERWVDR ITPAVTKNFL KPMLIVLIAA PLAILLIGPI GIWIGSAISA LVYTIHGYLG WLSVAIMGAL WPLLVMTGMH RVFTPTIIQT IAETGKEGMV MPSEIGANLS LGGSSLAVAW KTKNPELRQT ALAAAASAIM AGISEPALYG VAIRLKRPLI ASLISGFICG AVAGMAGLAS HSMAAPGLFT SVQFFDPANP MSIVWVFAVM ALAVVLSFIL TLLLGFEDIP VEEAAAEARK HQSAQPTVAK EVSLN
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