Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2979 |
Symbol | csrA |
ID | 5590395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2979455 |
End bp | 2979640 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640926627 |
Product | carbon storage regulator |
Protein accession | YP_001464003 |
Protein GI | 157158815 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000170939 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATTC TGACTCGTCG AGTTGGTGAG ACCCTCATGA TTGGGGATGA GGTCACCGTG ACAGTTTTAG GGGTAAAGGG CAACCAGGTA CGTATTGGCG TAAATGCCCC GAAGGAAGTT TCTGTTCACC GTGAAGAGAT CTACCAGCGT ATCCAGGCTG AAAAATCCCA GCAGTCCAGT TACTAA
|
Protein sequence | MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQAEKSQQSS Y
|
| |